Difference between revisions of "PWY-7184"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-...")
(Created page with "Category:Gene == Gene Tiso_gene_3855 == * right end position: ** 4501 * transcription direction: ** POSITIVE * left end position: ** 1467 * centisome position: ** 9.21193...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] ==
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== Gene Tiso_gene_3855 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** 4501
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783257 TAX-1783257]
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** POSITIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** 1467
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* common name:
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* centisome position:
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** L-lysine biosynthesis VI
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** 9.21193   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''7''' reactions found over '''7''' reactions in the full pathway
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* Reaction: [[KETOACYLCOATHIOL-RXN]]
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_18603]]
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** Source: [[annotation-experimental_annotation]]
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** 7 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-experimental_annotation]]
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* Reaction: [[RXN-10699]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** [[orthology-athaliana]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-10700]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[ASPARTATEKIN-RXN]]
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*** Assignment: ec-number
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** 4 associated gene(s):
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_17057]]
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*** Assignment: ec-number
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*** [[Tiso_gene_13809]]
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* Reaction: [[RXN-10701]]
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*** [[Tiso_gene_16097]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_4345]]
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*** Assignment: ec-number
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** 7 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-11246]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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** Source: [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** Assignment: ec-number
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*** [[orthology-creinhardtii]]
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* Reaction: [[RXN-12565]]
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* [[DIAMINOPIMDECARB-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_10737]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_12041]]
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*** Assignment: ec-number
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** 6 reconstruction source(s) associated:
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* Reaction: [[RXN-12710]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** [[orthology-athaliana]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-13617]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[DIAMINOPIMEPIM-RXN]]
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*** Assignment: ec-number
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** 0 associated gene:
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** Source: [[annotation-experimental_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-14268]]
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* [[DIHYDRODIPICSYN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_14829]]
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** Source: [[annotation-experimental_annotation]]
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** 3 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[manual-primary_network]]
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* Reaction: [[RXN-14274]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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* [[RXN-14014]]
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** Source: [[annotation-experimental_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_13314]]
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* Reaction: [[RXN-14277]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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* [[RXN-7737]]
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* Reaction: [[RXN-14394]]
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** 1 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_18833]]
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*** Assignment: ec-number
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** 6 reconstruction source(s) associated:
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** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-14774]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[orthology-synechocystis]]
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** Source: [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** Assignment: ec-number
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== Reaction(s) not found ==
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* Reaction: [[RXN-14788]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14793]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14803]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16137]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17778]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17782]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17787]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17791]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17795]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7654]]
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* [[PWY66-391]]
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* [[PWY-7606]]
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* [[PWY-7337]]
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* [[PWY-7340]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6946]]
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* [[FAO-PWY]]
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* [[PWY-735]]
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* [[PWY-5136]]
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* [[PWY-7726]]
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* [[PWY-6863]]
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* [[PWY-7339]]
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* [[PWY-6948]]
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* [[PWY-7288]]
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* [[PWY-6945]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: right end position=4501}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5097 PWY-5097]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-183939}}
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{{#set: left end position=1467}}
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{{#set: taxonomic range=TAX-183925}}
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{{#set: centisome position=9.21193    }}
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{{#set: taxonomic range=TAX-1783257}}
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{{#set: reaction associated=KETOACYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: pathway associated=PWY-6435|PWY-7654|PWY66-391|PWY-7606|PWY-7337|PWY-7340|PWY-7338|PWY-7094|PWY-6946|FAO-PWY|PWY-735|PWY-5136|PWY-7726|PWY-6863|PWY-7339|PWY-6948|PWY-7288|PWY-6945}}
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{{#set: taxonomic range=TAX-3398}}
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−
{{#set: common name=L-lysine biosynthesis VI}}
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−
{{#set: reaction found=7}}
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{{#set: total reaction=7}}
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−
{{#set: completion rate=100.0}}
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Revision as of 15:03, 21 March 2018

Gene Tiso_gene_3855

  • right end position:
    • 4501
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1467
  • centisome position:
    • 9.21193
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7184&oldid=32103"