Difference between revisions of "RXN-13304"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13304 RXN-13304] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13304 RXN-13304] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 +
** pyrimidine deoxyribonucleotides de novo biosynthesis I
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''9''' reactions in the full pathway
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** 1 [[CPD-14277]][c] '''=>''' 1 [[CPD-14282]][c] '''+''' 1 [[WATER]][c]
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* [[CDPREDUCT-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 (3R)-3-hydroxy-lignoceroyl-CoA[c] '''=>''' 1 trans-lignocer-2-enoyl-CoA[c] '''+''' 1 H2O[c]
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*** [[Tiso_gene_10617]]
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*** [[Tiso_gene_9916]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_9915]]
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== Pathways  ==
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*** [[Tiso_gene_10138]]
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
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** 6 reconstruction source(s) associated:
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** '''16''' reactions found over '''16''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
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* Category: [[annotation]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** Tool: [[pathwaytools]]
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* [[DCDPKIN-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_9290]]
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*** [[Tiso_gene_17271]]
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*** [[Tiso_gene_17272]]
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*** [[Tiso_gene_195]]
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*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_16529]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[DTDPKIN-RXN]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_18224]]
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*** [[Tiso_gene_16529]]
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*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_17271]]
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_9290]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_3755]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[DUDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_16529]]
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_9290]]
 +
*** [[Tiso_gene_17271]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DUTP-PYROP-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_18793]]
 +
*** [[Tiso_gene_18792]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
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* [[RXN-12195]]
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** 101 associated gene(s):
 +
*** [[Tiso_gene_1960]]
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*** [[Tiso_gene_11098]]
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*** [[Tiso_gene_12899]]
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*** [[Tiso_gene_2924]]
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*** [[Tiso_gene_14226]]
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*** [[Tiso_gene_674]]
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*** [[Tiso_gene_8601]]
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*** [[Tiso_gene_8584]]
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*** [[Tiso_gene_9959]]
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*** [[Tiso_gene_2929]]
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*** [[Tiso_gene_9423]]
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*** [[Tiso_gene_873]]
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*** [[Tiso_gene_8763]]
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*** [[Tiso_gene_9004]]
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*** [[Tiso_gene_14816]]
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*** [[Tiso_gene_5529]]
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*** [[Tiso_gene_4192]]
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*** [[Tiso_gene_8859]]
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*** [[Tiso_gene_14227]]
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*** [[Tiso_gene_9234]]
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*** [[Tiso_gene_38]]
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*** [[Tiso_gene_2889]]
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*** [[Tiso_gene_4194]]
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*** [[Tiso_gene_15043]]
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*** [[Tiso_gene_537]]
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*** [[Tiso_gene_4026]]
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*** [[Tiso_gene_14646]]
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*** [[Tiso_gene_195]]
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*** [[Tiso_gene_3653]]
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*** [[Tiso_gene_1444]]
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*** [[Tiso_gene_8949]]
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*** [[Tiso_gene_17616]]
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*** [[Tiso_gene_546]]
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*** [[Tiso_gene_13738]]
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*** [[Tiso_gene_538]]
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*** [[Tiso_gene_2449]]
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*** [[Tiso_gene_1959]]
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*** [[Tiso_gene_7387]]
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*** [[Tiso_gene_2447]]
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*** [[Tiso_gene_20353]]
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*** [[Tiso_gene_5166]]
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*** [[Tiso_gene_4596]]
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*** [[Tiso_gene_2448]]
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*** [[Tiso_gene_5525]]
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*** [[Tiso_gene_12148]]
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*** [[Tiso_gene_20327]]
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*** [[Tiso_gene_11012]]
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*** [[Tiso_gene_2176]]
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*** [[Tiso_gene_13325]]
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*** [[Tiso_gene_13268]]
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*** [[Tiso_gene_12149]]
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*** [[Tiso_gene_2451]]
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*** [[Tiso_gene_6614]]
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*** [[Tiso_gene_2897]]
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*** [[Tiso_gene_4436]]
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*** [[Tiso_gene_623]]
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*** [[Tiso_gene_9926]]
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*** [[Tiso_gene_6181]]
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*** [[Tiso_gene_16478]]
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*** [[Tiso_gene_6180]]
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*** [[Tiso_gene_1984]]
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*** [[Tiso_gene_2452]]
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*** [[Tiso_gene_15465]]
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*** [[Tiso_gene_4092]]
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*** [[Tiso_gene_7745]]
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*** [[Tiso_gene_829]]
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*** [[Tiso_gene_250]]
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*** [[Tiso_gene_1541]]
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*** [[Tiso_gene_199]]
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*** [[Tiso_gene_7123]]
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*** [[Tiso_gene_10282]]
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*** [[Tiso_gene_9114]]
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*** [[Tiso_gene_2450]]
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*** [[Tiso_gene_14474]]
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*** [[Tiso_gene_8461]]
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*** [[Tiso_gene_4437]]
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*** [[Tiso_gene_4726]]
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*** [[Tiso_gene_9659]]
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*** [[Tiso_gene_8950]]
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*** [[Tiso_gene_2068]]
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*** [[Tiso_gene_9243]]
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*** [[Tiso_gene_13264]]
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*** [[Tiso_gene_4330]]
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*** [[Tiso_gene_13681]]
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*** [[Tiso_gene_1610]]
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*** [[Tiso_gene_13653]]
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*** [[Tiso_gene_17449]]
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*** [[Tiso_gene_10221]]
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*** [[Tiso_gene_19098]]
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*** [[Tiso_gene_4155]]
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*** [[Tiso_gene_8164]]
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*** [[Tiso_gene_19350]]
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*** [[Tiso_gene_2631]]
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*** [[Tiso_gene_17751]]
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*** [[Tiso_gene_1611]]
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*** [[Tiso_gene_3287]]
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*** [[Tiso_gene_7734]]
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*** [[Tiso_gene_572]]
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*** [[Tiso_gene_1291]]
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*** [[Tiso_gene_14239]]
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*** [[Tiso_gene_8860]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[THYMIDYLATESYN-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_7708]]
 +
*** [[Tiso_gene_18478]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[UDPREDUCT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_10617]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: ec number=EC-4.2.1.134}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7184 PWY-7184]
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{{#set: in pathway=PWY-7036}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: reconstruction category=annotation}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis I}}
 +
{{#set: reaction found=9}}
 +
{{#set: total reaction=9}}
 +
{{#set: completion rate=100.0}}

Revision as of 15:04, 21 March 2018

Pathway PWY-7184

  • taxonomic range:
  • common name:
    • pyrimidine deoxyribonucleotides de novo biosynthesis I
  • Synonym(s):

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13304&oldid=32150"