Difference between revisions of "RXN-10062"

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(Created page with "Category:Gene == Gene Tiso_gene_5435 == * left end position: ** 3980 * transcription direction: ** NEGATIVE * right end position: ** 13467 * centisome position: ** 29.5383...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9666 RXN-9666] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_5435 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9666 RXN-9666] ==
* left end position:
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* direction:
** 3980
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
* right end position:
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** 13467
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* centisome position:
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** 29.538368   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[CATAL-RXN]]
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* With identifiers:
** [[pantograph]]-[[synechocystis]]
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** 1 [[OLEOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[OLEATE-CPD]][c] '''+''' 1 [[CO-A]][c]
* [[CYTOCHROME-C-PEROXIDASE-RXN]]
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* With common name(s):
** in-silico_annotation
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** 1 oleoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 oleate[c] '''+''' 1 coenzyme A[c]
***ec-number
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** experimental_annotation
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== Genes associated with this reaction  ==
***ec-number
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Genes have been associated with this reaction based on different elements listed below.
* [[RXN-12440]]
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* Gene: [[Tiso_gene_7477]]
** in-silico_annotation
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** Source: [[orthology-athaliana]]
***automated-name-match
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== Pathways  ==
* [[RXN-3521]]
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* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
** in-silico_annotation
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** '''3''' reactions found over '''16''' reactions in the full pathway
***automated-name-match
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
== Pathways associated ==
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** '''8''' reactions found over '''18''' reactions in the full pathway
* [[PWY-6960]]
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
* [[DETOX1-PWY-1]]
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** '''9''' reactions found over '''19''' reactions in the full pathway
* [[DETOX1-PWY]]
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* [[PWY-5996]], oleate biosynthesis II (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5996 PWY-5996]
* [[PWY-5506]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
* [[PWY-6959]]
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== Reconstruction information  ==
* [[PWY-6961]]
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* Category: [[orthology]]
* [[PWY-2261]]
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** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=3980}}
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* LIGAND-RXN:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08176 R08176]
{{#set: right end position=13467}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=29.538368    }}
+
{{#set: ec number=EC-3.1.2.2}}
{{#set: reaction associated=CATAL-RXN|CYTOCHROME-C-PEROXIDASE-RXN|RXN-12440|RXN-3521}}
+
{{#set: gene associated=Tiso_gene_7477}}
{{#set: pathway associated=PWY-6960|DETOX1-PWY-1|DETOX1-PWY|PWY-5506|PWY-6959|PWY-6961|PWY-2261}}
+
{{#set: in pathway=PWY-321|PWY-6733|PWY-1121|PWY-5996}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:04, 21 March 2018

Reaction RXN-9666

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oleoyl-CoA[c] + 1 H2O[c] => 1 H+[c] + 1 oleate[c] + 1 coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-321, cutin biosynthesis: PWY-321
    • 3 reactions found over 16 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-5996, oleate biosynthesis II (animals and fungi): PWY-5996
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links