Difference between revisions of "Tiso gene 19087"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 T...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5652 PWY-5652] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5652 PWY-5652] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
** ppGpp biosynthesis
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** 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
 
* Synonym(s):
 
* Synonym(s):
** guanosine 3'-diphosphate 5'-diphosphate biosynthesis
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''5''' reactions found over '''6''' reactions in the full pathway
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  '''1''' reactions found over '''5''' reactions in the full pathway
* [[GDPKIN-RXN]]
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* [[2-KETO-ADIPATE-DEHYDROG-RXN]]
** 6 associated gene(s):
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** 2 associated gene(s):
*** [[Tiso_gene_195]]
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*** [[Tiso_gene_9330]]
*** [[Tiso_gene_17271]]
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*** [[Tiso_gene_10209]]
*** [[Tiso_gene_9290]]
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** 2 reconstruction source(s) associated:
*** [[Tiso_gene_17272]]
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*** [[Tiso_gene_16529]]
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*** [[Tiso_gene_18224]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
*** [[orthology-synechocystis]]
 
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
* [[GDPPYPHOSKIN-RXN]]
 
** 3 associated gene(s):
 
*** [[Tiso_gene_6799]]
 
*** [[Tiso_gene_16305]]
 
*** [[Tiso_gene_7349]]
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-esiliculosus]]
 
* [[GTPPYPHOSKIN-RXN]]
 
** 3 associated gene(s):
 
*** [[Tiso_gene_6799]]
 
*** [[Tiso_gene_16305]]
 
*** [[Tiso_gene_7349]]
 
** 3 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-esiliculosus]]
 
* [[PPGPPSYN-RXN]]
 
** 1 associated gene(s):
 
*** [[Tiso_gene_6799]]
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
* [[RXN0-6427]]
 
** 1 associated gene(s):
 
*** [[Tiso_gene_6799]]
 
** 1 reconstruction source(s) associated:
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=PPPGPPHYDRO-RXN PPPGPPHYDRO-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.32-RXN 1.2.1.32-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2-AMINOMUCONATE-REDUCTASE-RXN 2-AMINOMUCONATE-REDUCTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=3.5.99.5-RXN 3.5.99.5-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN]
 
== External links  ==
 
== External links  ==
* ECOCYC:
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{{#set: taxonomic range=TAX-4751}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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{{#set: taxonomic range=TAX-33208}}
{{#set: taxonomic range=TAX-2}}
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{{#set: common name=2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA}}
{{#set: common name=ppGpp biosynthesis}}
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{{#set: reaction found=1}}
{{#set: common name=guanosine 3'-diphosphate 5'-diphosphate biosynthesis}}
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{{#set: total reaction=5}}
{{#set: reaction found=5}}
+
{{#set: completion rate=20.0}}
{{#set: total reaction=6}}
+
{{#set: completion rate=83.0}}
+

Revision as of 15:04, 21 March 2018

Pathway PWY-5652

  • taxonomic range:
  • common name:
    • 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA
  • Synonym(s):

Reaction(s) found

1 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links