Difference between revisions of "Sphingoids"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SIALATE-O-ACETYLESTERASE-RXN SIALATE-O-ACETYLESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Tiso_gene_19198 == * right end position: ** 2382 * transcription direction: ** NEGATIVE * left end position: ** 97 * centisome position: ** 3.846154...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SIALATE-O-ACETYLESTERASE-RXN SIALATE-O-ACETYLESTERASE-RXN] ==
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== Gene Tiso_gene_19198 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2382
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* common name:
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* transcription direction:
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** sialate_o-acetylesterase-like_protein
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** NEGATIVE
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** ORF
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* left end position:
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* ec number:
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** 97
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** [http://enzyme.expasy.org/EC/3.1.1.53 EC-3.1.1.53]
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* centisome position:
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** 3.846154   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[N-ACETYL-O-ACETYLNEURAMINATE]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-ACETYLNEURAMINATE]][c]
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* With common name(s):
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** 1 H2O[c] '''+''' 1 N-acetyl-O-acetylneuraminate[c] '''=>''' 1 acetate[c] '''+''' 1 H+[c] '''+''' 1 N-acetylneuraminate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4419]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4418]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17029]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-synechocystis]]
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== Pathways associated ==
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* [[NAGLIPASYN-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2382}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22600 22600]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=97}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01810 R01810]
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{{#set: centisome position=3.846154    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=UDPNACETYLGLUCOSAMACYLTRANS-RXN}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: pathway associated=NAGLIPASYN-PWY}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.1.53}}
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{{#set: gene associated=Tiso_gene_4419|Tiso_gene_4418|Tiso_gene_17029}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:04, 21 March 2018

Gene Tiso_gene_19198

  • right end position:
    • 2382
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 97
  • centisome position:
    • 3.846154
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Sphingoids&oldid=32231"