Difference between revisions of "RXN-11482"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15559 RXN-15559] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15559 RXN-15559] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
 
−
** ORF
 
−
** mitochondrial_substrate_carrier_family_protein
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.22 EC-6.1.1.22]
+
** [http://enzyme.expasy.org/EC/2.3.2.26 EC-2.3.2.26]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[HECT-Ubiquitin-carrier-protein-E3-L-cys]][c] '''+''' 1 [[S-ubiquitinyl-UCP-E2-L-cysteine]][c] '''=>''' 1 [[S-ubiquitinyl-HECT-E3-UCP-L-cysteine]][c] '''+''' 1 [[Ubiquitin-carrier-protein-E2-L-cysteine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-asparagine[c] '''+''' 1 tRNAasn[c] '''+''' 1 ATP[c] '''=>''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 a [HECT-type E3 ubiquitin transferase]-L-cysteine[c] '''+''' 1 an S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''=>''' 1 an S-ubiquitinyl-[HECT-type E3 ubiquitin transferase]-L-cysteine[c] '''+''' 1 an [E2 ubiquitin-conjugating enzyme]-L-cysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_9303]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_9304]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_9908]]
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_13908]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_6065]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11180 11180]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P39772 P39772]
 
−
** [http://www.uniprot.org/uniprot/O57980 O57980]
 
−
** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
 
−
** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
 
−
** [http://www.uniprot.org/uniprot/P47359 P47359]
 
−
** [http://www.uniprot.org/uniprot/O51128 O51128]
 
−
** [http://www.uniprot.org/uniprot/O83618 O83618]
 
−
** [http://www.uniprot.org/uniprot/O58008 O58008]
 
−
** [http://www.uniprot.org/uniprot/O96198 O96198]
 
−
** [http://www.uniprot.org/uniprot/P54262 P54262]
 
−
** [http://www.uniprot.org/uniprot/P75521 P75521]
 
−
** [http://www.uniprot.org/uniprot/Q48966 Q48966]
 
−
** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)}}
+
{{#set: ec number=EC-2.3.2.26}}
−
{{#set: common name=ORF}}
+
{{#set: in pathway=PWY-7511}}
−
{{#set: common name=mitochondrial_substrate_carrier_family_protein}}
+
−
{{#set: ec number=EC-6.1.1.22}}
+
−
{{#set: gene associated=Tiso_gene_9303|Tiso_gene_9304|Tiso_gene_9908|Tiso_gene_13908|Tiso_gene_6065}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:04, 21 March 2018

Reaction RXN-15559

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7511, protein ubiquitylation: PWY-7511
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11482&oldid=32235"