Difference between revisions of "CPD-6702"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5946 PWY-5946] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12459 RXN-12459] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_(guanine-n1)-methyltra...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5946 PWY-5946] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12459 RXN-12459] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
** δ-carotene biosynthesis
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** trna_(guanine-n1)-methyltransferase_family_protein
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** trna_(guanine-n1-)-methyltransferase_domain_containing_protein
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** mitochondrial_ribonuclease_p_protein_1_homolog
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.221 EC-2.1.1.221]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''1''' reactions in the full pathway
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* With identifiers:
* [[RXN1F-147]]
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** 1 [[Guanine9-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[tRNA-Containing-N1-Methylguanine-9]][c]
** 6 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_11980]]
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** 1 a guanine9 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an N1-methylguanine9 in tRNA[c]
*** [[Tiso_gene_8263]]
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*** [[Tiso_gene_4457]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_6282]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[Tiso_gene_3577]]
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* Gene: [[Tiso_gene_5025]]
*** [[Tiso_gene_1547]]
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** Source: [[annotation-in-silico_annotation]]
** 3 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_910]]
*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
*** [[orthology-esiliculosus]]
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*** Assignment: EC-NUMBER
== Reaction(s) not found ==
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* Gene: [[Tiso_gene_909]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_299]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-2763}}
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{{#set: common name=trna_(guanine-n1)-methyltransferase_family_protein}}
{{#set: taxonomic range=TAX-3041}}
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{{#set: common name=trna_(guanine-n1-)-methyltransferase_domain_containing_protein}}
{{#set: taxonomic range=TAX-1117}}
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{{#set: common name=mitochondrial_ribonuclease_p_protein_1_homolog}}
{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-2.1.1.221}}
{{#set: common name=δ-carotene biosynthesis}}
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{{#set: gene associated=Tiso_gene_5025|Tiso_gene_910|Tiso_gene_909|Tiso_gene_299}}
{{#set: reaction found=1}}
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{{#set: in pathway=}}
{{#set: total reaction=1}}
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{{#set: reconstruction category=annotation}}
{{#set: completion rate=100.0}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:05, 21 March 2018

Reaction RXN-12459

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trna_(guanine-n1)-methyltransferase_family_protein
    • trna_(guanine-n1-)-methyltransferase_domain_containing_protein
    • mitochondrial_ribonuclease_p_protein_1_homolog
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links