Difference between revisions of "GST-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-425 PWY66-425] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-425 PWY66-425] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 +
* common name:
 +
** L-lysine degradation II (L-pipecolate pathway)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''3''' reactions found over '''8''' reactions in the full pathway
** 1 [[CPD-7418]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[COUMARIN]][c] '''+''' 1 [[WATER]][c]
+
* [[2-AMINOADIPATE-AMINOTRANSFERASE-RXN]]
* With common name(s):
+
** 0 associated gene:
** 1 coumarinate[c] '''+''' 1 H+[c] '''=>''' 1 coumarin[c] '''+''' 1 H2O[c]
+
** 1 reconstruction source(s) associated:
 
+
*** [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
+
* [[2-KETO-ADIPATE-DEHYDROG-RXN]]
== Pathways  ==
+
** 2 associated gene(s):
* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
+
*** [[Tiso_gene_9330]]
** '''2''' reactions found over '''5''' reactions in the full pathway
+
*** [[Tiso_gene_10209]]
== Reconstruction information  ==
+
** 2 reconstruction source(s) associated:
* Category: [[annotation]]
+
*** [[orthology-athaliana]]
** Source: [[annotation-in-silico_annotation]]
+
*** [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
+
* [[RXN-10855]]
** Source: [[annotation-experimental_annotation]]
+
** 5 associated gene(s):
*** Tool: [[pathwaytools]]
+
*** [[Tiso_gene_6563]]
 +
*** [[Tiso_gene_6562]]
 +
*** [[Tiso_gene_5425]]
 +
*** [[Tiso_gene_5424]]
 +
*** [[Tiso_gene_16719]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=L-PIPECOLATE-OXIDASE-RXN L-PIPECOLATE-OXIDASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16267 RXN-16267]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8166 RXN-8166]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8172 RXN-8172]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-565 RXN66-565]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-40674}}
** [http://www.genome.jp/dbget-bin/www_bget?R04999 R04999]
+
{{#set: common name=L-lysine degradation II (L-pipecolate pathway)}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=3}}
{{#set: in pathway=PWY-5176}}
+
{{#set: total reaction=8}}
{{#set: reconstruction category=annotation}}
+
{{#set: completion rate=38.0}}
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:05, 21 March 2018

Pathway PWY66-425

  • taxonomic range:
  • common name:
    • L-lysine degradation II (L-pipecolate pathway)
  • Synonym(s):

Reaction(s) found

3 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links