Difference between revisions of "RXN-12870"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16138 RXN-16138] == * direction: ** LEFT-TO-RIGHT * common name: ** abhydrolase_domain-containi...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16138 RXN-16138] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641]
 
* common name:
 
* common name:
** abhydrolase_domain-containing_protein_4-like
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** norspermidine biosynthesis
** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
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* Synonym(s):
 
* Synonym(s):
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** sym-norspermidine biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''6''' reactions in the full pathway
** 1 [[CPD-17355]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-10244]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Glycerolipids]][c]
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 a [glycerolipid]-docosahexaenoate[c] '''+''' 1 H2O[c] '''=>''' 1 docosahexaenoate[c] '''+''' 1 H+[c] '''+''' 1 a glycerolipid[c]
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*** [[Tiso_gene_18603]]
 
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** 7 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
* [[Tiso_gene_12960]]
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*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
***EC-NUMBER
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*** [[orthology-synechocystis]]
* [[Tiso_gene_15047]]
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*** [[manual-primary_network]]
** IN-SILICO_ANNOTATION
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*** [[orthology-creinhardtii]]
***EC-NUMBER
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* [[ASPARTATEKIN-RXN]]
* [[Tiso_gene_12959]]
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** 4 associated gene(s):
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_4345]]
***EC-NUMBER
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*** [[Tiso_gene_17057]]
* [[Tiso_gene_15046]]
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*** [[Tiso_gene_13809]]
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_16097]]
***EC-NUMBER
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** 7 reconstruction source(s) associated:
== Pathways  ==
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*** [[annotation-experimental_annotation]]
* [[PWY66-397]], resolvin D biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-397 PWY66-397]
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*** [[orthology-esiliculosus]]
** '''1''' reactions found over '''11''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
* [[PWY66-395]], aspirin triggered resolvin D biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-395 PWY66-395]
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*** [[orthology-athaliana]]
** '''1''' reactions found over '''11''' reactions in the full pathway
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*** [[orthology-synechocystis]]
== Reconstruction information  ==
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*** [[manual-primary_network]]
* Category: [[annotation]]
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*** [[orthology-creinhardtii]]
** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.86-RXN 4.1.1.86-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R101-RXN R101-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11565 RXN-11565]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9380 RXN-9380]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-641}}
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
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{{#set: common name=norspermidine biosynthesis}}
{{#set: common name=ORF}}
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{{#set: common name=sym-norspermidine biosynthesis}}
{{#set: ec number=EC-3.1.1.4}}
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{{#set: reaction found=2}}
{{#set: gene associated=Tiso_gene_12960|Tiso_gene_15047|Tiso_gene_12959|Tiso_gene_15046}}
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{{#set: total reaction=6}}
{{#set: in pathway=PWY66-397|PWY66-395}}
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{{#set: completion rate=33.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:06, 21 March 2018

Pathway PWY-6562

  • taxonomic range:
  • common name:
    • norspermidine biosynthesis
  • Synonym(s):
    • sym-norspermidine biosynthesis

Reaction(s) found

2 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links