Difference between revisions of "Tiso gene 7507"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8022 RXN-8022] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** Crtlb ** phytoene desaturase (...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8022 RXN-8022] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* common name:
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** γ-glutamyl cycle
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* Synonym(s):
 
* Synonym(s):
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** glutathione metabolism
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** Crtlb
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** phytoene desaturase (ambiguous)
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** 2-step phytoene desaturase (ambiguous)
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** two-step phytoene desaturase (ambiguous)
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** CrtI (ambiguous)
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
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** 1 [[CPD1F-98]][c] '''+''' 1 [[Acceptor]][c] '''=>''' 1 [[Donor-H2]][c] '''+''' 1 [[NEUROSPORENE]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_3358]]
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** 1 all-trans-ζ-carotene[c] '''+''' 1 an oxidized electron acceptor[c] '''=>''' 1 a reduced electron acceptor[c] '''+''' 1 all-trans neurosporene[c]
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*** [[Tiso_gene_3359]]
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** 4 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_7142]]
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*** [[orthology-creinhardtii]]
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** Source: [[orthology-esiliculosus]]
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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* [[GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN]]
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* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
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** 2 associated gene(s):
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_1510]]
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== Reconstruction information  ==
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*** [[Tiso_gene_1247]]
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* Category: [[orthology]]
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** 2 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** [[orthology-esiliculosus]]
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* [[GLUTATHIONESYN-PWY]]
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** 0 associated gene:
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* [[RXN-6601]]
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** 1 associated gene(s):
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*** [[Tiso_gene_12321]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-6622]]
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** 2 associated gene(s):
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*** [[Tiso_gene_2704]]
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*** [[Tiso_gene_860]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30614 30614]
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{{#set: common name=γ-glutamyl cycle}}
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* LIGAND-RXN:
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{{#set: common name=glutathione metabolism}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04798 R04798]
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{{#set: reaction found=5}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=6}}
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{{#set: common name=Crtlb|phytoene desaturase (ambiguous)|2-step phytoene desaturase (ambiguous)|two-step phytoene desaturase (ambiguous)|CrtI (ambiguous)}}
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{{#set: completion rate=83.0}}
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{{#set: gene associated=Tiso_gene_7142}}
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{{#set: in pathway=PWY-6287}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:06, 21 March 2018

Reaction RXN-8022

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • Crtlb
    • phytoene desaturase (ambiguous)
    • 2-step phytoene desaturase (ambiguous)
    • two-step phytoene desaturase (ambiguous)
    • CrtI (ambiguous)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-ζ-carotene[c] + 1 an oxidized electron acceptor[c] => 1 a reduced electron acceptor[c] + 1 all-trans neurosporene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6287, neurosporene biosynthesis: PWY-6287
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7507&oldid=32378"