Difference between revisions of "PORPHOBILINOGEN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLLATE GLYCOLLATE] == * smiles: ** C(C(=O)[O-])O * inchi key: ** InChIKey=AEMRFAOFKBGASW-UH...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLLATE GLYCOLLATE] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] ==
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* smiles:
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* taxonomic range:
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** C(C(=O)[O-])O
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** InChIKey=AEMRFAOFKBGASW-UHFFFAOYSA-M
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* common name:
 
* common name:
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** glycolate
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** sucrose biosynthesis I (from photosynthesis)
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* molecular weight:
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** 75.044   
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* Synonym(s):
 
* Synonym(s):
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** hydroxyacetic acid
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** sucrose biosynthesis I (from Calvin cycle intermediates)
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** glycolic acid
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** sucrose biosynthesis I
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** glycollate
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[R00476]]
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'''7''' reactions found over '''9''' reactions in the full pathway
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* [[GCLDH]]
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* [[F16ALDOLASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** 6 associated gene(s):
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* [[GPH-RXN]]
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*** [[Tiso_gene_12272]]
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* [[GLYOXYLATE-REDUCTASE-NADP+-RXN]]
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*** [[Tiso_gene_65]]
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* [[GLYCLTD]]
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*** [[Tiso_gene_9119]]
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* [[GLYCOLALD-DEHYDROG-RXN]]
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*** [[Tiso_gene_14568]]
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== Reaction(s) of unknown directionality ==
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*** [[Tiso_gene_9179]]
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* [[GLYCOLATE-REDUCTASE-RXN]]
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*** [[Tiso_gene_9118]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[F16BDEPHOS-RXN]]
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** 7 associated gene(s):
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*** [[Tiso_gene_15398]]
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*** [[Tiso_gene_9435]]
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*** [[Tiso_gene_16502]]
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*** [[Tiso_gene_4905]]
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*** [[Tiso_gene_8226]]
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*** [[Tiso_gene_4904]]
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*** [[Tiso_gene_3483]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 5 associated gene(s):
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*** [[Tiso_gene_20000]]
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*** [[Tiso_gene_235]]
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*** [[Tiso_gene_10646]]
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*** [[Tiso_gene_3344]]
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*** [[Tiso_gene_6766]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PGLUCISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19480]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_3526]]
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*** [[Tiso_gene_18264]]
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*** [[Tiso_gene_3527]]
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*** [[Tiso_gene_18263]]
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*** [[Tiso_gene_12104]]
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*** [[Tiso_gene_14642]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PWY-7343]]
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** 0 associated gene:
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* [[SUCROSE-PHOSPHATE-SYNTHASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14247]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
 
== External links  ==
 
== External links  ==
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* CAS : 79-14-1
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* PLANTCYC : SUCSYN-PWY
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* METABOLIGHTS : MTBLC29805
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* METACYC:
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* DRUGBANK : DB03085
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=SUCSYN-PWY SUCSYN-PWY]
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* PUBCHEM:
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* ARACYC:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460308 5460308]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
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* HMDB : HMDB00115
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{{#set: taxonomic range=TAX-1117}}
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* LIGAND-CPD:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00160 C00160]
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{{#set: common name=sucrose biosynthesis I (from photosynthesis)}}
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* CHEMSPIDER:
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{{#set: common name=sucrose biosynthesis I (from Calvin cycle intermediates)|sucrose biosynthesis I}}
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** [http://www.chemspider.com/Chemical-Structure.4573887.html 4573887]
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{{#set: reaction found=7}}
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* CHEBI:
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{{#set: total reaction=9}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29805 29805]
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{{#set: completion rate=78.0}}
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* BIGG : glyclt
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{{#set: smiles=C(C(=O)[O-])O}}
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{{#set: inchi key=InChIKey=AEMRFAOFKBGASW-UHFFFAOYSA-M}}
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{{#set: common name=glycolate}}
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{{#set: molecular weight=75.044    }}
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{{#set: common name=hydroxyacetic acid|glycolic acid|glycollate}}
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{{#set: consumed by=R00476|GCLDH}}
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{{#set: produced by=GPH-RXN|GLYOXYLATE-REDUCTASE-NADP+-RXN|GLYCLTD|GLYCOLALD-DEHYDROG-RXN}}
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{{#set: reversible reaction associated=GLYCOLATE-REDUCTASE-RXN}}
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Revision as of 15:07, 21 March 2018

Pathway SUCSYN-PWY

  • taxonomic range:
  • common name:
    • sucrose biosynthesis I (from photosynthesis)
  • Synonym(s):
    • sucrose biosynthesis I (from Calvin cycle intermediates)
    • sucrose biosynthesis I

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PORPHOBILINOGEN&oldid=32484"