Difference between revisions of "R313-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17355 CPD-17355] == * common name: ** a [glycerolipid]-docosahexaenoate * Synonym(s): ** a...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamine_amido...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17355 CPD-17355] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-NH3-RXN GMP-SYN-NH3-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a [glycerolipid]-docosahexaenoate
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** glutamine_amidotransferase
 
* Synonym(s):
 
* Synonym(s):
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** a [glycerolipid]-docosahexaenoic acid
 
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** a [glycerolipid]-DHA
 
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** a [glycerolipid]-all-cis-docosa-4,7,10,13,16,19-hexaenoate
 
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** a [glycerolipid]-(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate
 
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** a [glycerolipid]-(4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate
 
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** a docosahexaenoyl-[glycerolipid]
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16138]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[AMMONIUM]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-16103]]
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** 1 ammonium[c] '''+''' 1 XMP[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 GMP[c] '''+''' 1 AMP[c] '''+''' 2 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6657]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a [glycerolipid]-docosahexaenoate}}
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* RHEA:
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{{#set: common name=a [glycerolipid]-docosahexaenoic acid|a [glycerolipid]-DHA|a [glycerolipid]-all-cis-docosa-4,7,10,13,16,19-hexaenoate|a [glycerolipid]-(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate|a [glycerolipid]-(4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate|a docosahexaenoyl-[glycerolipid]}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18301 18301]
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{{#set: consumed by=RXN-16138}}
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* LIGAND-RXN:
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{{#set: reversible reaction associated=RXN-16103}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamine_amidotransferase}}
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{{#set: gene associated=Tiso_gene_6657}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:08, 21 March 2018

Reaction GMP-SYN-NH3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamine_amidotransferase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R313-RXN&oldid=32584"