Difference between revisions of "ALANINE-DEG3-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-4 RXN6666-4] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_3056 == * right end position: ** 11216 * transcription direction: ** POSITIVE * left end position: ** 9014 * centisome position: ** 51.1432...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-4 RXN6666-4] ==
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== Gene Tiso_gene_3056 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11216
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.4.3.4 EC-1.4.3.4]
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** POSITIVE
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* left end position:
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** 9014
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* centisome position:
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** 51.143265   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CARBODEHYDRAT-RXN]]
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** 1 [[DOPAMINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[34-DIHYDROXYPHENYLACETALDEHYDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 dopamine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 ammonium[c] '''+''' 1 3,4-dihydroxyphenylacetaldehyde[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-5224]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_8756]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY6666-2]], dopamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY6666-2 PWY6666-2]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7431]], aromatic biogenic amine degradation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7431 PWY-7431]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-241]]
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* [[PWYQT-4429]]
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* [[PWY-7117]]
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* [[PWY-7115]]
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* [[PWY-6142]]
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* [[CYANCAT-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=11216}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27946 27946]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=9014}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04300 R04300]
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{{#set: centisome position=51.143265    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=CARBODEHYDRAT-RXN|RXN0-5224}}
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{{#set: ec number=EC-1.4.3.4}}
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{{#set: pathway associated=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
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{{#set: gene associated=Tiso_gene_8756}}
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{{#set: in pathway=PWY6666-2|PWY-7431}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:09, 21 March 2018

Gene Tiso_gene_3056

  • right end position:
    • 11216
  • transcription direction:
    • POSITIVE
  • left end position:
    • 9014
  • centisome position:
    • 51.143265
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ALANINE-DEG3-PWY&oldid=32629"