Difference between revisions of "5-OXOPROLINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-DEHYDROGENASE-RXN GLYCINE-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOCYL-TRNA-HYDROLASE-RXN AMINOCYL-TRNA-HYDROLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-DEHYDROGENASE-RXN GLYCINE-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOCYL-TRNA-HYDROLASE-RXN AMINOCYL-TRNA-HYDROLASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glycine_dehydrogenase_mitochondrial
+
** peptidyl-trna_hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.4.1.10 EC-1.4.1.10]
+
** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLY]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[N-Substituted-Aminoacyl-tRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-Substituted-Amino-Acids]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 glycine[c] '''<=>''' 1 glyoxylate[c] '''+''' 1 H+[c] '''+''' 1 ammonium[c] '''+''' 1 NADH[c]
+
** 1 an N-modified aminoacyl-[tRNA][c] '''+''' 1 H2O[c] '''=>''' 1 an uncharged tRNA[c] '''+''' 1 H+[c] '''+''' 1 an N-modified amino acid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_428]]
+
* Gene: [[Tiso_gene_13800]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_14300]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_7443]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15721 15721]
+
** [http://www.uniprot.org/uniprot/Q9JV42 Q9JV42]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P44682 P44682]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00365 R00365]
+
** [http://www.uniprot.org/uniprot/Q9PII7 Q9PII7]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/Q9CJI1 Q9CJI1]
−
{{#set: common name=glycine_dehydrogenase_mitochondrial}}
+
** [http://www.uniprot.org/uniprot/P0A7D1 P0A7D1]
−
{{#set: ec number=EC-1.4.1.10}}
+
** [http://www.uniprot.org/uniprot/Q59989 Q59989]
−
{{#set: gene associated=Tiso_gene_428}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=peptidyl-trna_hydrolase}}
 +
{{#set: ec number=EC-3.1.1.29}}
 +
{{#set: gene associated=Tiso_gene_13800|Tiso_gene_14300|Tiso_gene_7443}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:09, 21 March 2018

Reaction AMINOCYL-TRNA-HYDROLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peptidyl-trna_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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