Difference between revisions of "3.5.1.88-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLCOBINAMIDE ADENOSYLCOBINAMIDE] == * smiles: ** C[CH](CNC(CCC4(C8(N3([Co--]17([N+]5(C(=C...")
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[[Category:Pathway]]
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[[Category:Metabolite]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLCOBINAMIDE ADENOSYLCOBINAMIDE] ==
* taxonomic range:
+
* smiles:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** C[CH](CNC(CCC4(C8(N3([Co--]17([N+]5(C(=C(C)C2(=[N+]1C(C(C2CCC(N)=O)(CC(=O)N)C)(C)[CH]3C(CC(=O)N)4))C(C(CCC(=O)N)C=5C=C6(C(C)(C)C(CCC(=O)N)C(=[N+]67)C=8C))(CC(=O)N)C))CC9(OC(C(O)C(O)9)N%11(C=NC%10(=C(N)N=CN=C%10%11))))))C)=O)O
 
* common name:
 
* common name:
** protein ubiquitylation
+
** adenosylcobinamide
 +
* inchi key:
 +
** InChIKey=KQXSPGAEBZWHMC-VUCSARQQSA-M
 +
* molecular weight:
 +
** 1240.332   
 
* Synonym(s):
 
* Synonym(s):
 +
** AdoCbi
  
== Reaction(s) found ==
+
== Reaction(s) known to consume the compound ==
'''9''' reactions found over '''9''' reactions in the full pathway
+
== Reaction(s) known to produce the compound ==
* [[RXN-15556]]
+
* [[BTUR2-RXN]]
** 94 associated gene(s):
+
== Reaction(s) of unknown directionality ==
*** [[Tiso_gene_8801]]
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*** [[Tiso_gene_1253]]
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*** [[Tiso_gene_8636]]
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*** [[Tiso_gene_8048]]
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*** [[Tiso_gene_1588]]
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*** [[Tiso_gene_16913]]
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*** [[Tiso_gene_18824]]
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*** [[Tiso_gene_4460]]
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*** [[Tiso_gene_1427]]
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*** [[Tiso_gene_10782]]
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*** [[Tiso_gene_14452]]
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*** [[Tiso_gene_12619]]
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*** [[Tiso_gene_15214]]
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*** [[Tiso_gene_6946]]
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*** [[Tiso_gene_14181]]
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*** [[Tiso_gene_612]]
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*** [[Tiso_gene_4966]]
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*** [[Tiso_gene_16642]]
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*** [[Tiso_gene_5622]]
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*** [[Tiso_gene_9520]]
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*** [[Tiso_gene_17112]]
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*** [[Tiso_gene_19647]]
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*** [[Tiso_gene_6902]]
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*** [[Tiso_gene_1592]]
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*** [[Tiso_gene_13619]]
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*** [[Tiso_gene_1587]]
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*** [[Tiso_gene_557]]
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*** [[Tiso_gene_17196]]
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*** [[Tiso_gene_6910]]
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*** [[Tiso_gene_2226]]
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*** [[Tiso_gene_14650]]
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*** [[Tiso_gene_2802]]
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*** [[Tiso_gene_7719]]
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*** [[Tiso_gene_14182]]
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*** [[Tiso_gene_1589]]
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*** [[Tiso_gene_14360]]
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*** [[Tiso_gene_1582]]
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*** [[Tiso_gene_1590]]
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*** [[Tiso_gene_14567]]
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*** [[Tiso_gene_1593]]
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*** [[Tiso_gene_2932]]
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*** [[Tiso_gene_558]]
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*** [[Tiso_gene_15624]]
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*** [[Tiso_gene_3211]]
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*** [[Tiso_gene_17030]]
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*** [[Tiso_gene_14451]]
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*** [[Tiso_gene_4094]]
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*** [[Tiso_gene_11148]]
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*** [[Tiso_gene_1583]]
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*** [[Tiso_gene_5502]]
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*** [[Tiso_gene_15467]]
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*** [[Tiso_gene_3418]]
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*** [[Tiso_gene_4461]]
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*** [[Tiso_gene_15885]]
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*** [[Tiso_gene_7308]]
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*** [[Tiso_gene_9666]]
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*** [[Tiso_gene_7506]]
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*** [[Tiso_gene_17363]]
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*** [[Tiso_gene_6903]]
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*** [[Tiso_gene_6901]]
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*** [[Tiso_gene_3080]]
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*** [[Tiso_gene_17423]]
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*** [[Tiso_gene_17004]]
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*** [[Tiso_gene_8637]]
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*** [[Tiso_gene_8483]]
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*** [[Tiso_gene_12298]]
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*** [[Tiso_gene_17194]]
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*** [[Tiso_gene_4585]]
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*** [[Tiso_gene_12309]]
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*** [[Tiso_gene_3419]]
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*** [[Tiso_gene_11823]]
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*** [[Tiso_gene_3081]]
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*** [[Tiso_gene_1584]]
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*** [[Tiso_gene_18752]]
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*** [[Tiso_gene_2815]]
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*** [[Tiso_gene_17517]]
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*** [[Tiso_gene_1586]]
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*** [[Tiso_gene_12029]]
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*** [[Tiso_gene_9575]]
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*** [[Tiso_gene_16166]]
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*** [[Tiso_gene_20066]]
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*** [[Tiso_gene_10888]]
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*** [[Tiso_gene_15884]]
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*** [[Tiso_gene_1426]]
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*** [[Tiso_gene_15097]]
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*** [[Tiso_gene_1591]]
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*** [[Tiso_gene_9662]]
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*** [[Tiso_gene_1585]]
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*** [[Tiso_gene_5776]]
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*** [[Tiso_gene_12348]]
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*** [[Tiso_gene_4484]]
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*** [[Tiso_gene_17195]]
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*** [[Tiso_gene_3210]]
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*** [[Tiso_gene_7955]]
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** 3 reconstruction source(s) associated:
+
*** [[annotation-experimental_annotation]]
+
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-15559]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
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* [[RXN-15560]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
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* [[RXN-15561]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-15563]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
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* [[RXN-15564]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
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* [[RXN-16313]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
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* [[RXN-16314]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 88 associated gene(s):
+
*** [[Tiso_gene_7506]]
+
*** [[Tiso_gene_17194]]
+
*** [[Tiso_gene_6901]]
+
*** [[Tiso_gene_2802]]
+
*** [[Tiso_gene_7308]]
+
*** [[Tiso_gene_9662]]
+
*** [[Tiso_gene_4585]]
+
*** [[Tiso_gene_3080]]
+
*** [[Tiso_gene_1426]]
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*** [[Tiso_gene_8637]]
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*** [[Tiso_gene_13243]]
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*** [[Tiso_gene_2815]]
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*** [[Tiso_gene_1427]]
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*** [[Tiso_gene_2226]]
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*** [[Tiso_gene_5622]]
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*** [[Tiso_gene_16642]]
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*** [[Tiso_gene_1592]]
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*** [[Tiso_gene_18824]]
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*** [[Tiso_gene_7779]]
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*** [[Tiso_gene_18752]]
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*** [[Tiso_gene_5776]]
+
*** [[Tiso_gene_17030]]
+
*** [[Tiso_gene_9666]]
+
*** [[Tiso_gene_17195]]
+
*** [[Tiso_gene_14181]]
+
*** [[Tiso_gene_6910]]
+
*** [[Tiso_gene_1588]]
+
*** [[Tiso_gene_8483]]
+
*** [[Tiso_gene_1587]]
+
*** [[Tiso_gene_17517]]
+
*** [[Tiso_gene_8801]]
+
*** [[Tiso_gene_1586]]
+
*** [[Tiso_gene_19647]]
+
*** [[Tiso_gene_11148]]
+
*** [[Tiso_gene_3211]]
+
*** [[Tiso_gene_4569]]
+
*** [[Tiso_gene_6902]]
+
*** [[Tiso_gene_1590]]
+
*** [[Tiso_gene_15624]]
+
*** [[Tiso_gene_11407]]
+
*** [[Tiso_gene_14567]]
+
*** [[Tiso_gene_15214]]
+
*** [[Tiso_gene_5502]]
+
*** [[Tiso_gene_17196]]
+
*** [[Tiso_gene_7719]]
+
*** [[Tiso_gene_10888]]
+
*** [[Tiso_gene_12627]]
+
*** [[Tiso_gene_1583]]
+
*** [[Tiso_gene_8636]]
+
*** [[Tiso_gene_7955]]
+
*** [[Tiso_gene_1593]]
+
*** [[Tiso_gene_8048]]
+
*** [[Tiso_gene_17004]]
+
*** [[Tiso_gene_12348]]
+
*** [[Tiso_gene_1335]]
+
*** [[Tiso_gene_1591]]
+
*** [[Tiso_gene_14360]]
+
*** [[Tiso_gene_12029]]
+
*** [[Tiso_gene_9575]]
+
*** [[Tiso_gene_4461]]
+
*** [[Tiso_gene_16166]]
+
*** [[Tiso_gene_14182]]
+
*** [[Tiso_gene_1584]]
+
*** [[Tiso_gene_558]]
+
*** [[Tiso_gene_13619]]
+
*** [[Tiso_gene_557]]
+
*** [[Tiso_gene_4966]]
+
*** [[Tiso_gene_3418]]
+
*** [[Tiso_gene_12309]]
+
*** [[Tiso_gene_3081]]
+
*** [[Tiso_gene_15097]]
+
*** [[Tiso_gene_10524]]
+
*** [[Tiso_gene_1589]]
+
*** [[Tiso_gene_16913]]
+
*** [[Tiso_gene_17112]]
+
*** [[Tiso_gene_1253]]
+
*** [[Tiso_gene_3210]]
+
*** [[Tiso_gene_1582]]
+
*** [[Tiso_gene_4484]]
+
*** [[Tiso_gene_4094]]
+
*** [[Tiso_gene_6903]]
+
*** [[Tiso_gene_3419]]
+
*** [[Tiso_gene_6946]]
+
*** [[Tiso_gene_14650]]
+
*** [[Tiso_gene_4460]]
+
*** [[Tiso_gene_17423]]
+
*** [[Tiso_gene_17363]]
+
*** [[Tiso_gene_1585]]
+
** 2 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
+
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2759}}
+
* LIGAND-CPD:
{{#set: common name=protein ubiquitylation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C06508 C06508]
{{#set: reaction found=9}}
+
* HMDB : HMDB06903
{{#set: total reaction=9}}
+
* CHEBI:
{{#set: completion rate=100.0}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=2480 2480]
 +
* BIGG : adocbi
 +
* PUBCHEM:
 +
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91819767 91819767]
 +
{{#set: smiles=C[CH](CNC(CCC4(C8(N3([Co--]17([N+]5(C(=C(C)C2(=[N+]1C(C(C2CCC(N)=O)(CC(=O)N)C)(C)[CH]3C(CC(=O)N)4))C(C(CCC(=O)N)C=5C=C6(C(C)(C)C(CCC(=O)N)C(=[N+]67)C=8C))(CC(=O)N)C))CC9(OC(C(O)C(O)9)N%11(C=NC%10(=C(N)N=CN=C%10%11))))))C)=O)O}}
 +
{{#set: common name=adenosylcobinamide}}
 +
{{#set: inchi key=InChIKey=KQXSPGAEBZWHMC-VUCSARQQSA-M}}
 +
{{#set: molecular weight=1240.332    }}
 +
{{#set: common name=AdoCbi}}
 +
{{#set: produced by=BTUR2-RXN}}

Revision as of 15:11, 21 March 2018

Metabolite ADENOSYLCOBINAMIDE

  • smiles:
    • C[CH](CNC(CCC4(C8(N3([Co--]17([N+]5(C(=C(C)C2(=[N+]1C(C(C2CCC(N)=O)(CC(=O)N)C)(C)[CH]3C(CC(=O)N)4))C(C(CCC(=O)N)C=5C=C6(C(C)(C)C(CCC(=O)N)C(=[N+]67)C=8C))(CC(=O)N)C))CC9(OC(C(O)C(O)9)N%11(C=NC%10(=C(N)N=CN=C%10%11))))))C)=O)O
  • common name:
    • adenosylcobinamide
  • inchi key:
    • InChIKey=KQXSPGAEBZWHMC-VUCSARQQSA-M
  • molecular weight:
    • 1240.332
  • Synonym(s):
    • AdoCbi

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C[CH](CNC(CCC4(C8(N3([Co--]17([N+]5(C(=C(C)C2(=[N+]1C(C(C2CCC(N)=O)(CC(=O)N)C)(C)[CH]3C(CC(=O)N)4))C(C(CCC(=O)N)C=5C=C6(C(C)(C)C(CCC(=O)N)C(=[N+]67)C=8C))(CC(=O)N)C))CC9(OC(C(O)C(O)9)N%11(C=NC%10(=C(N)N=CN=C%10%11))))))C)=O)O" cannot be used as a page name in this wiki.