Difference between revisions of "RXN-11410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=INDOLE_ACETATE_AUXIN INDOLE_ACETATE_AUXIN] == * smiles: ** C([O-])(=O)CC1(=CNC2(C=CC=CC1=2)) *...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=INDOLE_ACETATE_AUXIN INDOLE_ACETATE_AUXIN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C([O-])(=O)CC1(=CNC2(C=CC=CC1=2))
 
* common name:
 
* common name:
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** 3-dehydroquinate_synthase
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** indole-3-acetate
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** pentafunctional_protein
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* inchi key:
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* ec number:
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** InChIKey=SEOVTRFCIGRIMH-UHFFFAOYSA-M
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** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
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* molecular weight:
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** 174.179   
 
* Synonym(s):
 
* Synonym(s):
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** IAA
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** indole-3-acetic acid
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** indoleacetic acid
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** auxin
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** indoleacetate
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** (indol-3-yl)acetate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
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* [[RXN-5581]]
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* With common name(s):
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* [[RXNN-404]]
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** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 phosphate[c]
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* [[RXN-10711]]
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* [[RXN-1404]]
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== Genes associated with this reaction  ==
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* [[RXN-10715]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_3445]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3446]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5752]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3447]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3974]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_5753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 87-51-4
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=801 801]
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** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
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* HMDB : HMDB00197
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.genome.jp/dbget-bin/www_bget?C00954 C00954]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
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** [http://www.chemspider.com/Chemical-Structure.779.html 779]
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** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P43879 P43879]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=30854 30854]
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** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
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* METABOLIGHTS : MTBLC30854
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** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
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{{#set: smiles=C([O-])(=O)CC1(=CNC2(C=CC=CC1=2))}}
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** [http://www.uniprot.org/uniprot/P07639 P07639]
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{{#set: common name=indole-3-acetate}}
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** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
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{{#set: inchi key=InChIKey=SEOVTRFCIGRIMH-UHFFFAOYSA-M}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=174.179    }}
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{{#set: common name=3-dehydroquinate_synthase}}
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{{#set: common name=IAA|indole-3-acetic acid|indoleacetic acid|auxin|indoleacetate|(indol-3-yl)acetate}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: produced by=RXN-5581|RXNN-404|RXN-10711|RXN-1404|RXN-10715}}
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{{#set: ec number=EC-4.2.3.4}}
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{{#set: gene associated=Tiso_gene_3445|Tiso_gene_3446|Tiso_gene_5752|Tiso_gene_3447|Tiso_gene_3974|Tiso_gene_5753}}
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{{#set: in pathway=PWY-6164}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:12, 21 March 2018

Metabolite INDOLE_ACETATE_AUXIN

  • smiles:
    • C([O-])(=O)CC1(=CNC2(C=CC=CC1=2))
  • common name:
    • indole-3-acetate
  • inchi key:
    • InChIKey=SEOVTRFCIGRIMH-UHFFFAOYSA-M
  • molecular weight:
    • 174.179
  • Synonym(s):
    • IAA
    • indole-3-acetic acid
    • indoleacetic acid
    • auxin
    • indoleacetate
    • (indol-3-yl)acetate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 87-51-4
  • PUBCHEM:
  • HMDB : HMDB00197
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC30854
"C([O-])(=O)CC1(=CNC2(C=CC=CC1=2))" cannot be used as a page name in this wiki.



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