Difference between revisions of "BILIVERDIN-REDUCTASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183980 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183980 TAX-183980]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183988 TAX-183988]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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* common name:
 
* common name:
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** methanofuran biosynthesis
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** 3-dehydroquinate_synthase
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** pentafunctional_protein
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[TYROSINE-DECARBOXYLASE-RXN]]
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** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[DEHYDROQUINATE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_3686]]
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** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 3-dehydroquinate[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15944 RXN-15944]
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* Gene: [[Tiso_gene_5752]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15945 RXN-15945]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15946 RXN-15946]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15947 RXN-15947]
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* Gene: [[Tiso_gene_3974]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15949 RXN-15949]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8119 RXN-8119]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8123 RXN-8123]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_3447]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_5753]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3445]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_3446]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-183980}}
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* RHEA:
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{{#set: taxonomic range=TAX-183988}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
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{{#set: taxonomic range=TAX-224756}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-183939}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
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{{#set: taxonomic range=TAX-183925}}
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* UNIPROT:
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{{#set: common name=methanofuran biosynthesis}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
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{{#set: completion rate=13.0}}
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** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
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** [http://www.uniprot.org/uniprot/P43879 P43879]
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** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
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** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
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** [http://www.uniprot.org/uniprot/P07639 P07639]
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** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-dehydroquinate_synthase}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-4.2.3.4}}
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{{#set: gene associated=Tiso_gene_5752|Tiso_gene_3974|Tiso_gene_3447|Tiso_gene_5753|Tiso_gene_3445|Tiso_gene_3446}}
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{{#set: in pathway=PWY-6164}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:12, 21 March 2018

Reaction 3-DEHYDROQUINATE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-dehydroquinate_synthase
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6164, 3-dehydroquinate biosynthesis I: PWY-6164
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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