Difference between revisions of "HBCHL"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Gene == Gene Tiso_gene_2613 == * right end position: ** 18160 * transcription direction: ** NEGATIVE * left end position: ** 15857 * centisome position: ** 74.153...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205] ==
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== Gene Tiso_gene_2613 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** 18160
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** NEGATIVE
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* common name:
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* left end position:
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** CMP phosphorylation
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** 15857
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* centisome position:
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** 74.15357   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''2''' reactions in the full pathway
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* Reaction: [[RXN-10625]]
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* [[CDPKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 6 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_17272]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_9290]]
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*** Assignment: automated-name-match
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*** [[Tiso_gene_18224]]
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** Source: [[orthology-athaliana]]
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*** [[Tiso_gene_17271]]
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** Source: [[orthology-synechocystis]]
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*** [[Tiso_gene_195]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_16529]]
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** Source: [[orthology-creinhardtii]]
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** 6 reconstruction source(s) associated:
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* Reaction: [[RXN-17428]]
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: automated-name-match
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: automated-name-match
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*** [[orthology-synechocystis]]
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** Source: [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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* Reaction: [[RXN-3142]]
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* [[RXN-11832]]
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** Source: [[orthology-athaliana]]
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** 4 associated gene(s):
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* Reaction: [[RXN-7658]]
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*** [[Tiso_gene_19734]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_14116]]
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*** Assignment: automated-name-match
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*** [[Tiso_gene_9739]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_2386]]
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*** Assignment: automated-name-match
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** 5 reconstruction source(s) associated:
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* Reaction: [[RXN-7659]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: automated-name-match
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*** [[annotation-experimental_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** Assignment: automated-name-match
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-7660]]
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== Reaction(s) not found ==
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-7664]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-7665]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-7666]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5064]]
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* [[PWY-5063]]
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* [[PWY1F-FLAVSYN]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: right end position=18160}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7205 PWY-7205]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: left end position=15857}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: centisome position=74.15357    }}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: reaction associated=RXN-10625|RXN-17428|RXN-3142|RXN-7658|RXN-7659|RXN-7660|RXN-7664|RXN-7665|RXN-7666}}
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{{#set: common name=CMP phosphorylation}}
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{{#set: pathway associated=PWY-5064|PWY-5063|PWY1F-FLAVSYN}}
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{{#set: reaction found=2}}
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{{#set: total reaction=2}}
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{{#set: completion rate=100.0}}
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Revision as of 15:12, 21 March 2018

Gene Tiso_gene_2613

  • right end position:
    • 18160
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 15857
  • centisome position:
    • 74.15357
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HBCHL&oldid=32896"