Difference between revisions of "Tiso gene 17239"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11519 CPD-11519] == * smiles: ** CCC=CCC4(C(=O)CCC(CCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase *...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11519 CPD-11519] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOKINASE-RXN FRUCTOKINASE-RXN] ==
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* smiles:
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* direction:
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** CCC=CCC4(C(=O)CCC(CCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PDDHCVXPABQISO-PEUIIYGWSA-J
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* common name:
 
* common name:
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** OPC8-3-hydroxyacyl-CoA
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** hexokinase
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* molecular weight:
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* ec number:
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** 1055.92   
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** [http://enzyme.expasy.org/EC/2.7.1.4 EC-2.7.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-3-hydroxy-2-enoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-10698]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[BETA-D-FRUCTOSE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
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* [[RXN-10697]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 β-D-fructofuranose[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1303]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_17974]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_3107]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[SUCUTIL-PWY]], sucrose degradation I (sucrose phosphotransferase): [http://metacyc.org/META/NEW-IMAGE?object=SUCUTIL-PWY SUCUTIL-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[SUCROSEUTIL2-PWY]], sucrose degradation VII (sucrose 3-dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=SUCROSEUTIL2-PWY SUCROSEUTIL2-PWY]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6531]], mannitol cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6531 PWY-6531]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 +
** '''14''' reactions found over '''18''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44237307 44237307]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16125 16125]
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{{#set: smiles=CCC=CCC4(C(=O)CCC(CCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)}}
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* LIGAND-RXN:
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{{#set: inchi key=InChIKey=PDDHCVXPABQISO-PEUIIYGWSA-J}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00760 R00760]
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{{#set: common name=OPC8-3-hydroxyacyl-CoA}}
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* UNIPROT:
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{{#set: molecular weight=1055.92    }}
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** [http://www.uniprot.org/uniprot/Q09124 Q09124]
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{{#set: common name=3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-3-hydroxy-2-enoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P24261 P24261]
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{{#set: consumed by=RXN-10698}}
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** [http://www.uniprot.org/uniprot/Q03417 Q03417]
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{{#set: produced by=RXN-10697}}
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** [http://www.uniprot.org/uniprot/Q9V0T7 Q9V0T7]
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** [http://www.uniprot.org/uniprot/Q9CFI9 Q9CFI9]
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** [http://www.uniprot.org/uniprot/P22824 P22824]
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** [http://www.uniprot.org/uniprot/P26420 P26420]
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** [http://www.uniprot.org/uniprot/P26984 P26984]
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** [http://www.uniprot.org/uniprot/P37829 P37829]
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** [http://www.uniprot.org/uniprot/P43468 P43468]
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** [http://www.uniprot.org/uniprot/P73521 P73521]
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** [http://www.uniprot.org/uniprot/O82616 O82616]
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** [http://www.uniprot.org/uniprot/O04897 O04897]
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** [http://www.uniprot.org/uniprot/Q42645 Q42645]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=hexokinase}}
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{{#set: ec number=EC-2.7.1.4}}
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{{#set: gene associated=Tiso_gene_1303|Tiso_gene_17974|Tiso_gene_3107}}
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{{#set: in pathway=PWY-5384|PWY-621|SUCUTIL-PWY|SUCROSEUTIL2-PWY|PWY-4101|PWY-6531|PWY-3801|P122-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:13, 21 March 2018

Reaction FRUCTOKINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hexokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 β-D-fructofuranose[c] => 1 H+[c] + 1 ADP[c] + 1 β-D-fructofuranose 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5384, sucrose degradation IV (sucrose phosphorylase): PWY-5384
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-621, sucrose degradation III (sucrose invertase): PWY-621
    • 4 reactions found over 4 reactions in the full pathway
  • SUCUTIL-PWY, sucrose degradation I (sucrose phosphotransferase): SUCUTIL-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • SUCROSEUTIL2-PWY, sucrose degradation VII (sucrose 3-dehydrogenase): SUCROSEUTIL2-PWY
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-4101, D-sorbitol degradation I: PWY-4101
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6531, mannitol cycle: PWY-6531
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-3801, sucrose degradation II (sucrose synthase): PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • P122-PWY, heterolactic fermentation: P122-PWY
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links





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