Difference between revisions of "RXN-16425"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_4659 == * left end position: ** 10639 * transcription direction: ** POSITIVE * right end position: ** 11632 * centisome position: ** 72.844...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10911 RXN-10911] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10911 RXN-10911] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** polyketide_synthase |
| − | + | ** ORF | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| + | ** 3,4-dihydroxyphenylglycol dehydrogenase | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[NADH]][c] '''+''' 1 [[DIHYDROXYPHENYLGLYCOLALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-11878]][c] '''+''' 1 [[NAD]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 NADH[c] '''+''' 1 3,4-dihydroxyphenylglycolaldehyde[c] '''+''' 1 H+[c] '''=>''' 1 3,4-dihydroxyphenylglycol[c] '''+''' 1 NAD+[c] |
| − | * [[PWY- | + | |
| − | * [[ | + | == Genes associated with this reaction == |
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_6562]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_7649]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_6563]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_18459]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_5425]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5424]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6342]], noradrenaline and adrenaline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6342 PWY-6342] | ||
| + | ** '''2''' reactions found over '''13''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31147 31147] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04880 R04880] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=polyketide_synthase}} |
| + | {{#set: common name=ORF}} | ||
| + | {{#set: ec number=EC-1.1.1.1}} | ||
| + | {{#set: common name=3,4-dihydroxyphenylglycol dehydrogenase}} | ||
| + | {{#set: gene associated=Tiso_gene_6562|Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_18459|Tiso_gene_5425|Tiso_gene_5424}} | ||
| + | {{#set: in pathway=PWY-6342}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:16, 21 March 2018
Contents
Reaction RXN-10911
- direction:
- LEFT-TO-RIGHT
- common name:
- polyketide_synthase
- ORF
- ec number:
- Synonym(s):
- 3,4-dihydroxyphenylglycol dehydrogenase
Reaction Formula
- With identifiers:
- 1 NADH[c] + 1 DIHYDROXYPHENYLGLYCOLALDEHYDE[c] + 1 PROTON[c] => 1 CPD-11878[c] + 1 NAD[c]
- With common name(s):
- 1 NADH[c] + 1 3,4-dihydroxyphenylglycolaldehyde[c] + 1 H+[c] => 1 3,4-dihydroxyphenylglycol[c] + 1 NAD+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6562
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_7649
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6563
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18459
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Gene: Tiso_gene_5425
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5424
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-6342, noradrenaline and adrenaline degradation: PWY-6342
- 2 reactions found over 13 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
