Difference between revisions of "Tiso gene 6562"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12252 RXN-12252] == * direction: ** LEFT-TO-RIGHT * common name: ** para-nitrobenzyl_esterase *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12252 RXN-12252] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** para-nitrobenzyl_esterase
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** adenosine ribonucleotides de novo biosynthesis
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** protein_chloroplastic
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−
** serine_esterase
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** alpha_beta_hydrolase_fold_protein
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−
** sialate_o-acetylesterase-like_protein
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−
** ORF
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−
** lysophospholipase
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−
** alpha_beta_hydrolase
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−
* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[CPD-13174]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13172]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-173]][c]
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* [[ADENYL-KIN-RXN]]
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* With common name(s):
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** 17 associated gene(s):
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** 1 salicyl-6-hydroxy-2-cyclohexene-on-oyl[c] '''+''' 1 H2O[c] '''=>''' 1 6-hydroxy-2-cyclohexen-one-carboxylate[c] '''+''' 1 H+[c] '''+''' 1 salicyl alcohol[c]
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*** [[Tiso_gene_4816]]
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*** [[Tiso_gene_5837]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_694]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_805]]
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* [[Tiso_gene_10066]]
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*** [[Tiso_gene_14116]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_19036]]
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***EC-NUMBER
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*** [[Tiso_gene_5388]]
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* [[Tiso_gene_4606]]
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*** [[Tiso_gene_13477]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_5081]]
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***EC-NUMBER
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*** [[Tiso_gene_5839]]
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* [[Tiso_gene_12686]]
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*** [[Tiso_gene_19734]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_1453]]
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***EC-NUMBER
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*** [[Tiso_gene_3353]]
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* [[Tiso_gene_16518]]
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*** [[Tiso_gene_12257]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_12256]]
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* [[Tiso_gene_9429]]
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*** [[Tiso_gene_5387]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_8576]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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* [[Tiso_gene_1537]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-athaliana]]
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* [[Tiso_gene_1922]]
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*** [[orthology-synechocystis]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_1538]]
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* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** 2 associated gene(s):
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* [[Tiso_gene_11351]]
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*** [[Tiso_gene_743]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_6453]]
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***AUTOMATED-NAME-MATCH
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** 6 reconstruction source(s) associated:
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* [[Tiso_gene_4650]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-synechocystis]]
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* [[Tiso_gene_2556]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-creinhardtii]]
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***EC-NUMBER
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* [[AMPSYN-RXN]]
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* [[Tiso_gene_17029]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 3 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_19778]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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* [[ATPSYN-RXN]]
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== Pathways  ==
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** 18 associated gene(s):
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== Reconstruction information  ==
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*** [[Tiso_gene_7213]]
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* Category: [[orthology]]
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*** [[Tiso_gene_2798]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_1366]]
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_10981]]
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* Category: [[annotation]]
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*** [[Tiso_gene_15850]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_7215]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_18105]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_6012]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_12618]]
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*** [[Tiso_gene_11754]]
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*** [[Tiso_gene_9460]]
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*** [[Tiso_gene_11192]]
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*** [[Tiso_gene_11155]]
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*** [[Tiso_gene_5307]]
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*** [[Tiso_gene_6592]]
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*** [[Tiso_gene_17383]]
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*** [[Tiso_gene_1365]]
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*** [[Tiso_gene_11753]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=para-nitrobenzyl_esterase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7219 PWY-7219]
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{{#set: common name=protein_chloroplastic}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=serine_esterase}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: common name=adenosine ribonucleotides de novo biosynthesis}}
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{{#set: common name=ORF}}
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{{#set: reaction found=4}}
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{{#set: common name=lysophospholipase}}
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{{#set: total reaction=4}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: completion rate=100.0}}
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{{#set: ec number=EC-3.1.1.1}}
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−
{{#set: gene associated=Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_12686|Tiso_gene_16518|Tiso_gene_9429|Tiso_gene_1537|Tiso_gene_1922|Tiso_gene_1538|Tiso_gene_11351|Tiso_gene_4650|Tiso_gene_2556|Tiso_gene_17029|Tiso_gene_19778}}
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−
{{#set: in pathway=}}
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−
{{#set: reconstruction category=orthology|annotation}}
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−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:16, 21 March 2018

Pathway PWY-7219

  • taxonomic range:
  • common name:
    • adenosine ribonucleotides de novo biosynthesis
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6562&oldid=33274"