Difference between revisions of "PWY-7170"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9531 RXN-9531] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-dodecanoyl-[acyl-carrie...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9531 RXN-9531] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
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* common name:
 
* common name:
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** glyoxylate assimilation
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** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
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** 3-oxoacyl-synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-dodecanoyl-ACPs]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_7965]]
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** 1 H+[c] '''+''' 1 a decanoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-dodecanoyl-[acp][c]
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*** [[Tiso_gene_2812]]
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*** [[Tiso_gene_5029]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_3800]]
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Genes have been associated with this reaction based on different elements listed below.
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** 5 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_15991]]
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*** [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* Gene: [[Tiso_gene_19302]]
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*** [[orthology-esiliculosus]]
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** Source: [[orthology-synechocystis]]
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* [[RXN-6383]]
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** Source: [[orthology-esiliculosus]]
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** 3 associated gene(s):
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* Gene: [[Tiso_gene_14485]]
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*** [[Tiso_gene_5857]]
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** Source: [[orthology-synechocystis]]
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*** [[Tiso_gene_16703]]
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_14257]]
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* Gene: [[Tiso_gene_5939]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: EC-NUMBER
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: EC-NUMBER
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== Reaction(s) not found ==
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRAMALYL-COA-LYASE-RXN CITRAMALYL-COA-LYASE-RXN]
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13230 RXN-13230]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8960 RXN-8960]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8961 RXN-8961]
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
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** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8965 RXN-8965]
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
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** Source: [[orthology-synechocystis]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-200795}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-183924}}
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{{#set: common name=3-oxo-dodecanoyl-[acyl-carrier protein] synthase}}
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{{#set: common name=glyoxylate assimilation}}
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{{#set: common name=3-oxoacyl-synthase}}
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{{#set: reaction found=2}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: total reaction=11}}
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{{#set: gene associated=Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_5939}}
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{{#set: completion rate=18.0}}
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{{#set: in pathway=PWY-5971}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:17, 21 March 2018

Reaction RXN-9531

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-dodecanoyl-[acyl-carrier protein] synthase" cannot be used as a page name in this wiki.




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