Difference between revisions of "CPD-17641"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5499 PWY-5499] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1441 RXN0-1441] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5499 PWY-5499] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
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** ORF
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** vitamin B6 degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.1.53 EC-3.6.1.53]
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** [http://enzyme.expasy.org/EC/3.6.1.13 EC-3.6.1.13]
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* Synonym(s):
 
* Synonym(s):
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** pyridoxine degradation
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** pyridoxamine degradation
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** pyridoxal degradation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''1''' reaction(s) found
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** 1 [[WATER]][c] '''+''' 1 [[ADENOSINE_DIPHOSPHATE_RIBOSE]][c] '''=>''' 1 [[AMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CPD-15317]][c]
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** [[PYRIDOXAL-4-DEHYDROGENASE-RXN]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 H2O[c] '''+''' 1 ADP-D-ribose[c] '''=>''' 1 AMP[c] '''+''' 2 H+[c] '''+''' 1 D-ribofuranose 5-phosphate[c]
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* '''8''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.29-RXN 3.5.1.29-RXN]
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE-4-OXIDASE-RXN PYRIDOXINE-4-OXIDASE-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8757 RXN-8757]
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* [[Tiso_gene_15496]]
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** [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.51-RXN 4.1.1.51-RXN]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=4-PYRIDOXOLACTONASE-RXN 4-PYRIDOXOLACTONASE-RXN]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=1.14.12.4-RXN 1.14.12.4-RXN]
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* [[Tiso_gene_17630]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8756 RXN-8756]
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** [[pantograph]]-[[esiliculosus]]
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** [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.30-RXN 2.6.1.30-RXN]
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* [[Tiso_gene_9180]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7189]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17632]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2747]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1224}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10412 10412]
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{{#set: common name=vitamin B6 degradation}}
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* LIGAND-RXN:
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{{#set: common name=pyridoxine degradation|pyridoxamine degradation|pyridoxal degradation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01054 R01054]
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{{#set: reaction found=1}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction not found=8}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.6.1.53}}
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{{#set: ec number=EC-3.6.1.13}}
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{{#set: gene associated=Tiso_gene_15496|Tiso_gene_17630|Tiso_gene_9180|Tiso_gene_7189|Tiso_gene_17632|Tiso_gene_2747}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:11, 10 January 2018

Pathway PWY-5499

  • taxonomic range:
  • common name:
    • vitamin B6 degradation
  • Synonym(s):
    • pyridoxine degradation
    • pyridoxamine degradation
    • pyridoxal degradation

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-17641&oldid=11866"