Difference between revisions of "PWY-5835"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_17027 == * left end position: ** 2529 * transcription direction: ** POSITIVE * right end position: ** 3897 * centisome position: ** 63.7509...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUMARYLACETOACETASE-RXN FUMARYLACETOACETASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FUMARYLACETOACETASE-RXN FUMARYLACETOACETASE-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** fumarylacetoacetate_hydrolase |
| − | + | ** protein_fah-1 | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/3.7.1.2 EC-3.7.1.2] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[4-FUMARYL-ACETOACETATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[PROTON]][c] |
| − | *** | + | * With common name(s): |
| − | ** [[ | + | ** 1 4-fumaryl-acetoacetate[c] '''+''' 1 H2O[c] '''=>''' 1 fumarate[c] '''+''' 1 acetoacetate[c] '''+''' 1 H+[c] |
| − | == | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_5675]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | * Gene: [[Tiso_gene_2213]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10244 10244] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01364 R01364] |
| − | {{#set: | + | * UNIPROT: |
| + | ** [http://www.uniprot.org/uniprot/P16930 P16930] | ||
| + | ** [http://www.uniprot.org/uniprot/P35505 P35505] | ||
| + | ** [http://www.uniprot.org/uniprot/P25093 P25093] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=fumarylacetoacetate_hydrolase}} | ||
| + | {{#set: common name=protein_fah-1}} | ||
| + | {{#set: ec number=EC-3.7.1.2}} | ||
| + | {{#set: gene associated=Tiso_gene_5675|Tiso_gene_2213}} | ||
| + | {{#set: in pathway=TYRFUMCAT-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:19, 21 March 2018
Contents
Reaction FUMARYLACETOACETASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- fumarylacetoacetate_hydrolase
- protein_fah-1
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 4-FUMARYL-ACETOACETATE[c] + 1 WATER[c] => 1 FUM[c] + 1 3-KETOBUTYRATE[c] + 1 PROTON[c]
- With common name(s):
- 1 4-fumaryl-acetoacetate[c] + 1 H2O[c] => 1 fumarate[c] + 1 acetoacetate[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5675
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_2213
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- TYRFUMCAT-PWY, L-tyrosine degradation I: TYRFUMCAT-PWY
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
