Difference between revisions of "CODH-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-114 CPD1F-114] == * smiles: ** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-114 CPD1F-114] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C
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* common name:
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** all-trans-lycopene
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* inchi key:
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** InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N
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* molecular weight:
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** 536.882   
 
* Synonym(s):
 
* Synonym(s):
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** ψ,ψ-carotene
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN1F-147]]
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** 1 [[WATER]][c] '''+''' 1 [[1-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12483]][c]
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* [[RXN1F-150]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 H2O[c] '''+''' 1 paraxanthine[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 1,7-dimethylurate[c]
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* [[R96]]
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* [[RXN-8042]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11775]]
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** [[pantograph]]-[[athaliana]]
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== Pathways  ==
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIPID_MAPS : LMPR01070257
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** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=446925 446925]
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{{#set: gene associated=Tiso_gene_11775}}
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* HMDB : HMDB03000
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{{#set: in pathway=PWY-6632}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05432 C05432]
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{{#set: reconstruction source=orthology-athaliana}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.chemspider.com/Chemical-Structure.394156.html 394156]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15948 15948]
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* METABOLIGHTS : MTBLC15948
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{{#set: smiles=CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C}}
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{{#set: common name=all-trans-lycopene}}
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{{#set: inchi key=InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N}}
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{{#set: molecular weight=536.882    }}
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{{#set: common name=ψ,ψ-carotene}}
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{{#set: consumed by=RXN1F-147|RXN1F-150}}
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{{#set: produced by=R96|RXN-8042}}

Revision as of 15:21, 21 March 2018

Metabolite CPD1F-114

  • smiles:
    • CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC=C(CCC=C(C)C)C)C)C)C)C)C)C
  • common name:
    • all-trans-lycopene
  • inchi key:
    • InChIKey=OAIJSZIZWZSQBC-GYZMGTAESA-N
  • molecular weight:
    • 536.882
  • Synonym(s):
    • ψ,ψ-carotene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • LIPID_MAPS : LMPR01070257
  • PUBCHEM:
  • HMDB : HMDB03000
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC15948




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