Difference between revisions of "PWY-7606"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXYURIDINE DEOXYURIDINE] == * smiles: ** C1(=CN(C(=O)NC(=O)1)C2(CC(O)C(CO)O2)) * inchi key: *...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** prolyl_4-hydroxylas...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | + | ||
− | + | ||
* common name: | * common name: | ||
− | ** | + | ** prolyl_4-hydroxylase |
− | * | + | ** ORF |
− | ** | + | * ec number: |
+ | ** [http://enzyme.expasy.org/EC/1.14.11.2 EC-1.14.11.2] | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | == Reaction | + | == Reaction Formula == |
− | = | + | * With identifiers: |
− | * [[ | + | ** 1 [[PROCOLLAGEN-L-PROLINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-6321]][c] |
− | == | + | * With common name(s): |
− | * [[ | + | ** 1 a [procollagen]-L-proline[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 a [procollagen] trans 4-hyroxy-L-proline[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_4246]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[Tiso_gene_18689]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_18933]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_9035]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_3021]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_13008]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Tiso_gene_9636]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_9165]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_6296]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_2158]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_16122]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_9455]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_16842]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_17823]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_18208]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_292]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_18145]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_9873]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_15328]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_1468]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_2280]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_19638]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_17593]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_18235]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_15594]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_8652]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_17919]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | * Gene: [[Tiso_gene_9227]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | == Pathways == | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | * | + | * LIGAND-RXN: |
− | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03219 R03219] | |
− | * | + | * UNIPROT: |
− | * | + | ** [http://www.uniprot.org/uniprot/P21195 P21195] |
− | ** [http:// | + | ** [http://www.uniprot.org/uniprot/Q10576 Q10576] |
− | * | + | ** [http://www.uniprot.org/uniprot/P16924 P16924] |
− | * | + | ** [http://www.uniprot.org/uniprot/P13674 P13674] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P05307 P05307] |
− | * | + | ** [http://www.uniprot.org/uniprot/P09102 P09102] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P07237 P07237] |
− | * | + | ** [http://www.uniprot.org/uniprot/Q922C8 Q922C8] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/P04785 P04785] |
− | * | + | ** [http://www.uniprot.org/uniprot/P54001 P54001] |
− | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: | + | {{#set: common name=prolyl_4-hydroxylase}} |
− | {{#set: common name= | + | {{#set: common name=ORF}} |
− | {{#set: | + | {{#set: ec number=EC-1.14.11.2}} |
− | {{#set: | + | {{#set: gene associated=Tiso_gene_4246|Tiso_gene_18689|Tiso_gene_18933|Tiso_gene_9035|Tiso_gene_3021|Tiso_gene_13008|Tiso_gene_9636|Tiso_gene_9165|Tiso_gene_6296|Tiso_gene_2158|Tiso_gene_16122|Tiso_gene_9455|Tiso_gene_16842|Tiso_gene_17823|Tiso_gene_18208|Tiso_gene_292|Tiso_gene_18145|Tiso_gene_9873|Tiso_gene_15328|Tiso_gene_1468|Tiso_gene_2280|Tiso_gene_19638|Tiso_gene_17593|Tiso_gene_18235|Tiso_gene_15594|Tiso_gene_8652|Tiso_gene_17919|Tiso_gene_9227}} |
− | {{#set: | + | {{#set: in pathway=}} |
− | {{#set: | + | {{#set: reconstruction category=orthology|annotation}} |
+ | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 15:21, 21 March 2018
Contents
Reaction 1.14.11.2-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- prolyl_4-hydroxylase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROCOLLAGEN-L-PROLINE[c] + 1 OXYGEN-MOLECULE[c] + 1 2-KETOGLUTARATE[c] => 1 SUC[c] + 1 CARBON-DIOXIDE[c] + 1 CPD-6321[c]
- With common name(s):
- 1 a [procollagen]-L-proline[c] + 1 oxygen[c] + 1 2-oxoglutarate[c] => 1 succinate[c] + 1 CO2[c] + 1 a [procollagen] trans 4-hyroxy-L-proline[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_4246
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18689
- Source: orthology-esiliculosus
- Gene: Tiso_gene_18933
- Source: orthology-esiliculosus
- Gene: Tiso_gene_9035
- Source: orthology-esiliculosus
- Gene: Tiso_gene_3021
- Source: orthology-esiliculosus
- Gene: Tiso_gene_13008
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_9636
- Source: orthology-esiliculosus
- Gene: Tiso_gene_9165
- Source: orthology-esiliculosus
- Gene: Tiso_gene_6296
- Source: orthology-esiliculosus
- Gene: Tiso_gene_2158
- Source: orthology-esiliculosus
- Gene: Tiso_gene_16122
- Source: orthology-esiliculosus
- Gene: Tiso_gene_9455
- Source: orthology-esiliculosus
- Gene: Tiso_gene_16842
- Source: orthology-esiliculosus
- Gene: Tiso_gene_17823
- Source: orthology-esiliculosus
- Gene: Tiso_gene_18208
- Source: orthology-esiliculosus
- Gene: Tiso_gene_292
- Source: orthology-esiliculosus
- Gene: Tiso_gene_18145
- Source: orthology-esiliculosus
- Gene: Tiso_gene_9873
- Source: orthology-esiliculosus
- Gene: Tiso_gene_15328
- Source: orthology-esiliculosus
- Gene: Tiso_gene_1468
- Source: orthology-esiliculosus
- Gene: Tiso_gene_2280
- Source: orthology-esiliculosus
- Gene: Tiso_gene_19638
- Source: orthology-esiliculosus
- Gene: Tiso_gene_17593
- Source: orthology-esiliculosus
- Gene: Tiso_gene_18235
- Source: orthology-esiliculosus
- Gene: Tiso_gene_15594
- Source: orthology-esiliculosus
- Gene: Tiso_gene_8652
- Source: orthology-esiliculosus
- Gene: Tiso_gene_17919
- Source: orthology-esiliculosus
- Gene: Tiso_gene_9227
- Source: orthology-esiliculosus
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links