Difference between revisions of "FUM"

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(Created page with "Category:Gene == Gene Tiso_gene_9644 == * left end position: ** 2645 * transcription direction: ** POSITIVE * right end position: ** 7517 * centisome position: ** 28.88500...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_9644 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
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* left end position:
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* direction:
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** 2645
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
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* right end position:
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** 7517
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* centisome position:
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** 28.885006   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.1.4.17-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-12935]][c] '''+''' 1 [[PRENAL]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 4'-apo-β-carotenal[c] '''+''' 1 3-methyl-2-butenal[c]
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* [[35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[APN]]
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* Gene: [[Tiso_gene_4653]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-esiliculosus]]
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* [[RXN0-5038]]
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* Gene: [[Tiso_gene_7740]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2645}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
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{{#set: right end position=7517}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=28.885006    }}
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{{#set: ec number=EC-1.13.11.59}}
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{{#set: reaction associated=3.1.4.17-RXN|35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN|APN|RXN0-5038}}
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{{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}}
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{{#set: in pathway=PWY-6681}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:22, 21 March 2018

Reaction RXN-11989

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 torulene[c] + 1 oxygen[c] => 1 4'-apo-β-carotenal[c] + 1 3-methyl-2-butenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6681, neurosporaxanthin biosynthesis: PWY-6681
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=FUM&oldid=33843"