Difference between revisions of "PHOSPHONOTASE-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGFTm FGFTm] == * direction: ** LEFT-TO-RIGHT * common name: ** N2-Formyl-N1-(5-phospho-D-ribosyl)g...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-1...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGFTm FGFTm] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide formyltransferase, mitochondria
+
** glutamate-1-semialdehyde_-aminomutase_chloroplastic
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][m] '''+''' 1.0 [[THF]][m] '''+''' 3.0 [[PROTON]][m] '''=>''' 1.0 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][m] '''+''' 1.0 [[WATER]][m] '''+''' 1.0 [[5-10-METHENYL-THF]][m]
+
** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide[m] '''+''' 1.0 tetrahydropteroyl mono-L-glutamate[m] '''+''' 3.0 H+[m] '''=>''' 1.0 N1-(5-phospho-β-D-ribosyl)glycinamide[m] '''+''' 1.0 H2O[m] '''+''' 1.0 5,10-methenyltetrahydrofolate mono-L-glutamate[m]
+
** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1369]]
+
* Gene: [[Tiso_gene_8141]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P18492 P18492]
 +
** [http://www.uniprot.org/uniprot/P21267 P21267]
 +
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
 +
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
 +
** [http://www.uniprot.org/uniprot/P23893 P23893]
 +
** [http://www.uniprot.org/uniprot/O26330 O26330]
 +
** [http://www.uniprot.org/uniprot/P30949 P30949]
 +
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
 +
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
 +
** [http://www.uniprot.org/uniprot/O29027 O29027]
 +
** [http://www.uniprot.org/uniprot/P45621 P45621]
 +
** [http://www.uniprot.org/uniprot/P24630 P24630]
 +
** [http://www.uniprot.org/uniprot/P31593 P31593]
 +
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
 +
** [http://www.uniprot.org/uniprot/P48247 P48247]
 +
** [http://www.uniprot.org/uniprot/P46716 P46716]
 +
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
 +
** [http://www.uniprot.org/uniprot/O74061 O74061]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide formyltransferase, mitochondria}}
+
{{#set: common name=glutamate-1-semialdehyde_-aminomutase_chloroplastic}}
−
{{#set: gene associated=Tiso_gene_1369}}
+
{{#set: ec number=EC-5.4.3.8}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Tiso_gene_8141}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-5188}}
−
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:22, 21 March 2018

Reaction GSAAMINOTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamate-1-semialdehyde_-aminomutase_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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