Difference between revisions of "PWY-5"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENETETRAHYDROMETHANOPTERIN METHYLENETETRAHYDROMETHANOPTERIN] == * smiles: ** CC4([CH]3(C(...")
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[[Category:Pathway]]
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[[Category:Metabolite]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENETETRAHYDROMETHANOPTERIN METHYLENETETRAHYDROMETHANOPTERIN] ==
* taxonomic range:
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* smiles:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* common name:
 
* common name:
** L-arginine degradation VI (arginase 2 pathway)
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** 5,10-methylene-tetrahydromethanopterin
 +
* inchi key:
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** InChIKey=GBMIGEWJAPFSQI-CAFBYHECSA-K
 +
* molecular weight:
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** 785.677   
 
* Synonym(s):
 
* Synonym(s):
** L-proline biosynthesis from arginine
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** N5,N10-methylene-5,6,7,8-tetrahydromethanopterin
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** 5,10-methylene-5,6,7,8-tetrahydromethanopterin
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** methylene-H4MPT
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** 5,10-methylene-H4MPT
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** N5,N10-methylenetetrahydromethanopterin
  
== Reaction(s) found ==
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== Reaction(s) known to consume the compound ==
'''4''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-15635]]
* [[ARGINASE-RXN]]
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== Reaction(s) known to produce the compound ==
** 1 associated gene(s):
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== Reaction(s) of unknown directionality ==
*** [[Tiso_gene_4415]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11231]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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* [[PYRROLINECARBREDUCT-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_8625]]
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*** [[Tiso_gene_19254]]
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*** [[Tiso_gene_17059]]
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*** [[Tiso_gene_20218]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPONTPRO-RXN]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33090}}
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* PUBCHEM:
{{#set: taxonomic range=TAX-1117}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46931094 46931094]
{{#set: taxonomic range=TAX-4751}}
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* HMDB : HMDB60401
{{#set: common name=L-arginine degradation VI (arginase 2 pathway)}}
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* CHEBI:
{{#set: common name=L-proline biosynthesis from arginine}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57818 57818]
{{#set: reaction found=4}}
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* LIGAND-CPD:
{{#set: total reaction=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04377 C04377]
{{#set: completion rate=100.0}}
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{{#set: smiles=CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))}}
 +
{{#set: common name=5,10-methylene-tetrahydromethanopterin}}
 +
{{#set: inchi key=InChIKey=GBMIGEWJAPFSQI-CAFBYHECSA-K}}
 +
{{#set: molecular weight=785.677    }}
 +
{{#set: common name=N5,N10-methylene-5,6,7,8-tetrahydromethanopterin|5,10-methylene-5,6,7,8-tetrahydromethanopterin|methylene-H4MPT|5,10-methylene-H4MPT|N5,N10-methylenetetrahydromethanopterin}}
 +
{{#set: consumed by=RXN-15635}}

Revision as of 15:25, 21 March 2018

Metabolite METHYLENETETRAHYDROMETHANOPTERIN

  • smiles:
    • CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))
  • common name:
    • 5,10-methylene-tetrahydromethanopterin
  • inchi key:
    • InChIKey=GBMIGEWJAPFSQI-CAFBYHECSA-K
  • molecular weight:
    • 785.677
  • Synonym(s):
    • N5,N10-methylene-5,6,7,8-tetrahydromethanopterin
    • 5,10-methylene-5,6,7,8-tetrahydromethanopterin
    • methylene-H4MPT
    • 5,10-methylene-H4MPT
    • N5,N10-methylenetetrahydromethanopterin

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))" cannot be used as a page name in this wiki.