Difference between revisions of "Tiso gene 17601"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNDEACET-RXN ACETYLORNDEACET-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** aldo-ket...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNDEACET-RXN ACETYLORNDEACET-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 +
** aldo-keto_reductase_family_4_member_c9_isoform_x2
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.1.16 EC-3.5.1.16]
+
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''<=>''' 1 [[L-ORNITHINE]][c] '''+''' 1 [[ACET]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[ADENOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 N-acetyl-L-ornithine[c] '''<=>''' 1 L-ornithine[c] '''+''' 1 acetate[c]
+
** 1 H+[c] '''+''' 1 adenosine[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 inosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16201]]
+
* Gene: [[Tiso_gene_19373]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_16879]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_18322]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
+
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15941 15941]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00669 R00669]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23908 P23908]
+
** [http://www.uniprot.org/uniprot/P22333 P22333]
−
** [http://www.uniprot.org/uniprot/Q9CI04 Q9CI04]
+
** [http://www.uniprot.org/uniprot/P00813 P00813]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P03958 P03958]
−
{{#set: ec number=EC-3.5.1.16}}
+
** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
−
{{#set: gene associated=Tiso_gene_16201|Tiso_gene_16879}}
+
** [http://www.uniprot.org/uniprot/P55266 P55266]
−
{{#set: in pathway=GLUTORN-PWY}}
+
** [http://www.uniprot.org/uniprot/P53984 P53984]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=aldo-keto_reductase_family_4_member_c9_isoform_x2}}
 +
{{#set: ec number=EC-3.5.4.4}}
 +
{{#set: gene associated=Tiso_gene_19373|Tiso_gene_18322}}
 +
{{#set: in pathway=PWY-6609|PWY0-1296|PWY-6611|SALVADEHYPOX-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:26, 21 March 2018

Reaction ADENODEAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • aldo-keto_reductase_family_4_member_c9_isoform_x2
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 adenosine[c] + 1 H2O[c] => 1 ammonium[c] + 1 inosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6609, adenine and adenosine salvage III: PWY-6609
    • 3 reactions found over 4 reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation: PWY0-1296
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6611, adenine and adenosine salvage V: PWY-6611
    • 1 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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