Difference between revisions of "RXN-16017"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridine_synthase...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ERYTHRO-4-HYDROXY-GLUTAMATE L-ERYTHRO-4-HYDROXY-GLUTAMATE] == * smiles: ** C([O-])(C(CC(O)C([...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ERYTHRO-4-HYDROXY-GLUTAMATE L-ERYTHRO-4-HYDROXY-GLUTAMATE] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C([O-])(C(CC(O)C([O-])=O)[N+])=O
 
* common name:
 
* common name:
** trna_pseudouridine_synthase
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** erythro-4-hydroxy-L-glutamate
** trna_pseudouridinesynthase
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* inchi key:
* ec number:
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** InChIKey=HBDWQSHEVMSFGY-STHAYSLISA-M
** [http://enzyme.expasy.org/EC/5.4.99.28 EC-5.4.99.28]
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* molecular weight:
 +
** 162.122   
 
* Synonym(s):
 
* Synonym(s):
 +
** (4S)-4-hydroxy-L-glutamic acid
 +
** (4S)-4-hydroxy-L-glutamate
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[Uridine32-in-tRNA]][c] '''=>''' 1 [[tRNA-pseudouridine32]][c]
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== Reaction(s) of unknown directionality ==
* With common name(s):
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* [[HYDROXYPYRROLINEDEH-RXN]]
** 1 a uridine32 in tRNA[c] '''=>''' 1 a pseudouridine32 in tRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9833]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4020]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18959]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4021]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2988]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_11913]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19622]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
{{#set: common name=trna_pseudouridine_synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6971086 6971086]
{{#set: common name=trna_pseudouridinesynthase}}
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* CHEMSPIDER:
{{#set: ec number=EC-5.4.99.28}}
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** [http://www.chemspider.com/Chemical-Structure.5341963.html 5341963]
{{#set: gene associated=Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_18959|Tiso_gene_4021|Tiso_gene_2988|Tiso_gene_11913|Tiso_gene_19622}}
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* CHEBI:
{{#set: in pathway=}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=6331 6331]
{{#set: reconstruction category=annotation}}
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* METABOLIGHTS : MTBLC6331
{{#set: reconstruction source=annotation-in-silico_annotation}}
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* LIGAND-CPD:
{{#set: reconstruction tool=pathwaytools}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05947 C05947]
 +
{{#set: smiles=C([O-])(C(CC(O)C([O-])=O)[N+])=O}}
 +
{{#set: common name=erythro-4-hydroxy-L-glutamate}}
 +
{{#set: inchi key=InChIKey=HBDWQSHEVMSFGY-STHAYSLISA-M}}
 +
{{#set: molecular weight=162.122    }}
 +
{{#set: common name=(4S)-4-hydroxy-L-glutamic acid|(4S)-4-hydroxy-L-glutamate}}
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{{#set: reversible reaction associated=HYDROXYPYRROLINEDEH-RXN}}

Revision as of 16:26, 21 March 2018

Metabolite L-ERYTHRO-4-HYDROXY-GLUTAMATE

  • smiles:
    • C([O-])(C(CC(O)C([O-])=O)[N+])=O
  • common name:
    • erythro-4-hydroxy-L-glutamate
  • inchi key:
    • InChIKey=HBDWQSHEVMSFGY-STHAYSLISA-M
  • molecular weight:
    • 162.122
  • Synonym(s):
    • (4S)-4-hydroxy-L-glutamic acid
    • (4S)-4-hydroxy-L-glutamate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C([O-])(C(CC(O)C([O-])=O)[N+])=O" cannot be used as a page name in this wiki.