Difference between revisions of "Tiso gene 7067"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6140 PWY-6140] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16017 RXN-16017] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6140 PWY-6140] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16017 RXN-16017] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
* ec number:
* common name:
+
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
** CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis
+
 
* Synonym(s):
 
* Synonym(s):
** CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononic acid biosynthesis
 
** CMP-3-deoxy-D-glycero-D-galacto-nonulosonic acid biosynthesis
 
** CMP-3-deoxy-D-glycero-D-galacto-nonulosonate biosynthesis
 
** CMP-KDN biosynthesis
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''1''' reactions found over '''4''' reactions in the full pathway
+
* With identifiers:
* [[MANNKIN-RXN]]
+
** 14 [[NADPH]][c] '''+''' 10 [[MALONYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 23 [[PROTON]][c] '''=>''' 11 [[CO-A]][c] '''+''' 14 [[NADP]][c] '''+''' 9 [[WATER]][c] '''+''' 1 [[CPD-10244]][c] '''+''' 10 [[CARBON-DIOXIDE]][c]
** 2 associated gene(s):
+
* With common name(s):
*** [[Tiso_gene_3107]]
+
** 14 NADPH[c] '''+''' 10 malonyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''+''' 23 H+[c] '''=>''' 11 coenzyme A[c] '''+''' 14 NADP+[c] '''+''' 9 H2O[c] '''+''' 1 docosahexaenoate[c] '''+''' 10 CO2[c]
*** [[Tiso_gene_1303]]
+
 
** 3 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
*** [[annotation-in-silico_annotation]]
+
== Pathways  ==
*** [[annotation-experimental_annotation]]
+
* [[PWY-7585]], docosahexaenoate biosynthesis II (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7585 PWY-7585]
*** [[orthology-creinhardtii]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
== Reaction(s) not found ==
+
== Reconstruction information  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9991 RXN-9991]
+
* Category: [[gap-filling]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9992 RXN-9992]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9993 RXN-9993]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-2759}}
+
{{#set: ec number=EC-2.3.1}}
{{#set: common name=CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis}}
+
{{#set: in pathway=PWY-7585}}
{{#set: common name=CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononic acid biosynthesis|CMP-3-deoxy-D-glycero-D-galacto-nonulosonic acid biosynthesis|CMP-3-deoxy-D-glycero-D-galacto-nonulosonate biosynthesis|CMP-KDN biosynthesis}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reaction found=1}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: total reaction=4}}
+
{{#set: reconstruction tool=meneco}}
{{#set: completion rate=25.0}}
+
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 15:27, 21 March 2018

Reaction RXN-16017

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7585, docosahexaenoate biosynthesis II (bacteria): PWY-7585
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links