Difference between revisions of "CPD-14423"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-332...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 
* common name:
 
* common name:
−
** cholesterol biosynthesis III (via desmosterol)
+
** incomplete reductive TCA cycle
 
* Synonym(s):
 
* Synonym(s):
 +
** citric acid cycle variant
 +
** tricarboxylic acid cycle variant
 +
** TCA cycle variation I
 +
** incomplete reductive tricarboxylic acid cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''7''' reactions found over '''22''' reactions in the full pathway
+
  '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[RXN66-27]]
+
* [[FUMHYDR-RXN]]
−
** 1 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Tiso_gene_8982]]
+
*** [[Tiso_gene_3691]]
−
** 1 reconstruction source(s) associated:
+
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN66-303]]
+
*** [[annotation-in-silico_annotation]]
−
** 1 associated gene(s):
+
*** [[orthology-athaliana]]
−
*** [[Tiso_gene_8263]]
+
*** [[manual-primary_network]]
−
** 1 reconstruction source(s) associated:
+
*** [[orthology-creinhardtii]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN66-304]]
+
*** [[annotation-in-silico_annotation]]
−
** 1 associated gene(s):
+
*** [[orthology-athaliana]]
−
*** [[Tiso_gene_8263]]
+
*** [[orthology-synechocystis]]
−
** 1 reconstruction source(s) associated:
+
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PYRUVATE-CARBOXYLASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_15144]]
 +
*** [[Tiso_gene_15145]]
 +
*** [[Tiso_gene_2812]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN66-305]]
+
* [[SUCCCOASYN-RXN]]
−
** 1 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Tiso_gene_8263]]
+
*** [[Tiso_gene_15846]]
−
** 1 reconstruction source(s) associated:
+
*** [[Tiso_gene_11866]]
−
*** [[orthology-esiliculosus]]
+
** 7 reconstruction source(s) associated:
−
* [[RXN66-306]]
+
*** [[annotation-experimental_annotation]]
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_10982]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-esiliculosus]]
+
−
* [[RXN66-313]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_897]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-esiliculosus]]
+
−
* [[RXN66-318]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_897]]
+
−
** 1 reconstruction source(s) associated:
+
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6132 PWY-6132]
+
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6132 PWY-6132]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11887 RXN-11887]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-28 RXN66-28]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-310 RXN66-310]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-311 RXN66-311]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-312 RXN66-312]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-314 RXN66-314]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-315 RXN66-315]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-316 RXN66-316]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-317 RXN66-317]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-319 RXN66-319]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-320 RXN66-320]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33208}}
+
{{#set: taxonomic range=TAX-224756}}
−
{{#set: common name=cholesterol biosynthesis III (via desmosterol)}}
+
{{#set: taxonomic range=TAX-183939}}
−
{{#set: reaction found=7}}
+
{{#set: taxonomic range=TAX-183925}}
−
{{#set: total reaction=22}}
+
{{#set: common name=incomplete reductive TCA cycle}}
−
{{#set: completion rate=32.0}}
+
{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
 +
{{#set: reaction found=4}}
 +
{{#set: total reaction=7}}
 +
{{#set: completion rate=57.0}}

Revision as of 15:27, 21 March 2018

Pathway P42-PWY

  • taxonomic range:
  • common name:
    • incomplete reductive TCA cycle
  • Synonym(s):
    • citric acid cycle variant
    • tricarboxylic acid cycle variant
    • TCA cycle variation I
    • incomplete reductive tricarboxylic acid cycle

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-14423&oldid=34269"