Difference between revisions of "Deoxy-Ribonucleoside-Triphosphates"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glucose-6-p...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-g...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glucose-6-phosphate_1-dehydrogenase
+
** alpha-galactosidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.49 EC-1.1.1.49]
+
** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADP]][c] '''+''' 1 [[D-glucopyranose-6-phosphate]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[MELIBIOSE]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADP+[c] '''+''' 1 D-glucopyranose 6-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 6-phospho D-glucono-1,5-lactone[c]
+
** 1 H2O[c] '''+''' 1 melibiose[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 D-glucopyranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16918]]
+
* Gene: [[Tiso_gene_16101]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_14877]]
+
* Gene: [[Tiso_gene_8673]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_2588]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_4615]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_3392]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7268 PWY-7268]
+
* [[PWY0-1301]], melibiose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1301 PWY0-1301]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
−
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-synechocystis]]
+
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15841 15841]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11411 P11411]
+
** [http://www.uniprot.org/uniprot/P16551 P16551]
−
** [http://www.uniprot.org/uniprot/P12646 P12646]
+
** [http://www.uniprot.org/uniprot/P27756 P27756]
−
** [http://www.uniprot.org/uniprot/Q00612 Q00612]
+
** [http://www.uniprot.org/uniprot/P04824 P04824]
−
** [http://www.uniprot.org/uniprot/P54996 P54996]
+
** [http://www.uniprot.org/uniprot/P06720 P06720]
−
** [http://www.uniprot.org/uniprot/P21907 P21907]
+
** [http://www.uniprot.org/uniprot/P06280 P06280]
−
** [http://www.uniprot.org/uniprot/P54547 P54547]
+
** [http://www.uniprot.org/uniprot/P51569 P51569]
−
** [http://www.uniprot.org/uniprot/O51581 O51581]
+
** [http://www.uniprot.org/uniprot/O93816 O93816]
−
** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
+
** [http://www.uniprot.org/uniprot/Q03647 Q03647]
−
** [http://www.uniprot.org/uniprot/P11413 P11413]
+
** [http://www.uniprot.org/uniprot/P14749 P14749]
−
** [http://www.uniprot.org/uniprot/P29686 P29686]
+
** [http://www.uniprot.org/uniprot/P28351 P28351]
−
** [http://www.uniprot.org/uniprot/P44311 P44311]
+
** [http://www.uniprot.org/uniprot/P43467 P43467]
−
** [http://www.uniprot.org/uniprot/P56110 P56110]
+
** [http://www.uniprot.org/uniprot/Q99172 Q99172]
−
** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
+
** [http://www.uniprot.org/uniprot/P41945 P41945]
−
** [http://www.uniprot.org/uniprot/O25730 O25730]
+
** [http://www.uniprot.org/uniprot/P41946 P41946]
−
** [http://www.uniprot.org/uniprot/O51240 O51240]
+
** [http://www.uniprot.org/uniprot/P41947 P41947]
−
** [http://www.uniprot.org/uniprot/O66787 O66787]
+
** [http://www.uniprot.org/uniprot/Q92457 Q92457]
−
** [http://www.uniprot.org/uniprot/P05370 P05370]
+
** [http://www.uniprot.org/uniprot/Q92456 Q92456]
−
** [http://www.uniprot.org/uniprot/P11410 P11410]
+
** [http://www.uniprot.org/uniprot/Q92451 Q92451]
−
** [http://www.uniprot.org/uniprot/P11412 P11412]
+
** [http://www.uniprot.org/uniprot/O04943 O04943]
−
** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
+
** [http://www.uniprot.org/uniprot/O04944 O04944]
−
** [http://www.uniprot.org/uniprot/P48828 P48828]
+
** [http://www.uniprot.org/uniprot/Q39811 Q39811]
−
** [http://www.uniprot.org/uniprot/P37986 P37986]
+
** [http://www.uniprot.org/uniprot/Q41100 Q41100]
−
** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
+
** [http://www.uniprot.org/uniprot/Q42656 Q42656]
−
** [http://www.uniprot.org/uniprot/Q27741 Q27741]
+
−
** [http://www.uniprot.org/uniprot/P48826 P48826]
+
−
** [http://www.uniprot.org/uniprot/Q42919 Q42919]
+
−
** [http://www.uniprot.org/uniprot/P37830 P37830]
+
−
** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
+
−
** [http://www.uniprot.org/uniprot/Q49700 Q49700]
+
−
** [http://www.uniprot.org/uniprot/P73411 P73411]
+
−
** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
+
−
** [http://www.uniprot.org/uniprot/Q43793 Q43793]
+
−
** [http://www.uniprot.org/uniprot/O65856 O65856]
+
−
** [http://www.uniprot.org/uniprot/Q43839 Q43839]
+
−
** [http://www.uniprot.org/uniprot/O81978 O81978]
+
−
** [http://www.uniprot.org/uniprot/O24357 O24357]
+
−
** [http://www.uniprot.org/uniprot/O24358 O24358]
+
−
** [http://www.uniprot.org/uniprot/O24359 O24359]
+
−
** [http://www.uniprot.org/uniprot/O22404 O22404]
+
−
** [http://www.uniprot.org/uniprot/O22405 O22405]
+
−
** [http://www.uniprot.org/uniprot/O22406 O22406]
+
−
** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
+
−
** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glucose-6-phosphate_1-dehydrogenase}}
+
{{#set: common name=alpha-galactosidase}}
−
{{#set: ec number=EC-1.1.1.49}}
+
{{#set: ec number=EC-3.2.1.22}}
−
{{#set: gene associated=Tiso_gene_16918|Tiso_gene_14877}}
+
{{#set: gene associated=Tiso_gene_16101|Tiso_gene_8673|Tiso_gene_2588|Tiso_gene_4615|Tiso_gene_3392}}
−
{{#set: in pathway=PWY-7268|P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
+
{{#set: in pathway=PWY0-1301}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:27, 21 March 2018

Reaction ALPHAGALACTOSID-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • alpha-galactosidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1301, melibiose degradation: PWY0-1301
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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