Difference between revisions of "Tiso gene 5042"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BTUR2-RXN BTUR2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_8723 == * right end position: ** 4472 * transcription direction: ** POSITIVE * left end position: ** 1 * centisome position: ** 1.004520400...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BTUR2-RXN BTUR2-RXN] ==
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== Gene Tiso_gene_8723 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4472
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.17 EC-2.5.1.17]
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** POSITIVE
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* left end position:
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** 1
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* centisome position:
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** 1.004520400e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GPH-RXN]]
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** 1 [[COBINAMIDE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[P3I]][c] '''+''' 1 [[ADENOSYLCOBINAMIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 cobinamide[c] '''+''' 1 ATP[c] '''=>''' 1 PPPi[c] '''+''' 1 adenosylcobinamide[c]
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* Reaction: [[QUINOPRIBOTRANS-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_6190]]
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* [[PWY-5316]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-5653]]
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== Pathways ==
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* [[PYRIDNUCSYN-PWY]]
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* [[COBALSYN-PWY]], adenosylcobalamin salvage from cobinamide I: [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY]
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* [[PWY-181]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7342]]
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* [[PWY-6269]], adenosylcobalamin salvage from cobinamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6269 PWY-6269]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4472}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14725 14725]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07268 R07268]
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{{#set: centisome position=1.004520400e-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=GPH-RXN|QUINOPRIBOTRANS-RXN}}
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{{#set: ec number=EC-2.5.1.17}}
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{{#set: pathway associated=PWY-5316|PWY-5653|PYRIDNUCSYN-PWY|PWY-181|PWY-7342}}
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{{#set: gene associated=Tiso_gene_6190}}
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{{#set: in pathway=COBALSYN-PWY|PWY-6269}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:27, 21 March 2018

Gene Tiso_gene_8723

  • right end position:
    • 4472
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1
  • centisome position:
    • 1.004520400e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5042&oldid=34288"