Difference between revisions of "Tiso gene 8488"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17832 RXN-17832] == * direction: ** LEFT-TO-RIGHT * common name: ** trypsin ** trypsin_family *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17832 RXN-17832] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** trypsin
 +
** trypsin_family
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.170 EC-2.3.1.170]
+
** [http://enzyme.expasy.org/EC/3.4.21.4 EC-3.4.21.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 3 [[MALONYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 4 [[PROTON]][c] '''=>''' 1 [[WATER]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-3041]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[CPD-19202]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-19203]][c] '''+''' 1 [[CPD-19205]][c]
 
* With common name(s):
 
* With common name(s):
−
** 3 malonyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 4-coumaroyl-CoA[c] '''+''' 4 H+[c] '''=>''' 1 H2O[c] '''+''' 4 coenzyme A[c] '''+''' 1 isoliquiritigenin[c] '''+''' 3 CO2[c] '''+''' 1 NADP+[c]
+
** 1 L-4-hydroxyphenylglycine-L-arginyl-D-4-hydroxyphenylglycine-L-seryl-L 4-hydroxyphenylglycine[c] '''+''' 1 H2O[c] '''=>''' 1 D-4-hydroxyphenylglycine-L-seryl-L 4-hydroxyphenylglycine[c] '''+''' 1 L-4-hydroxyphenylglycine-L-arginine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2613]]
+
* Gene: [[Tiso_gene_4147]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_13074]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_12875]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_19324]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
+
* [[PWY-7797]], nocardicin A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7797 PWY-7797]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10584 10584]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R06568 R06568]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07254 R07254]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.3.1.170}}
+
{{#set: common name=trypsin}}
−
{{#set: gene associated=Tiso_gene_2613}}
+
{{#set: common name=trypsin_family}}
−
{{#set: in pathway=PWY1F-FLAVSYN}}
+
{{#set: ec number=EC-3.4.21.4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_4147|Tiso_gene_13074|Tiso_gene_12875|Tiso_gene_19324}}
−
{{#set: reconstruction source=orthology-athaliana}}
+
{{#set: in pathway=PWY-7797}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 16:29, 21 March 2018

Reaction RXN-17832

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trypsin
    • trypsin_family
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-4-hydroxyphenylglycine-L-arginyl-D-4-hydroxyphenylglycine-L-seryl-L 4-hydroxyphenylglycine[c] + 1 H2O[c] => 1 D-4-hydroxyphenylglycine-L-seryl-L 4-hydroxyphenylglycine[c] + 1 L-4-hydroxyphenylglycine-L-arginine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7797, nocardicin A biosynthesis: PWY-7797
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8488&oldid=34450"