Difference between revisions of "RXN-16313"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13673 RXN-13673] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** glutathione_s-transf...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13673 RXN-13673] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** ORF
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** ammonia assimilation cycle II
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** glutathione_s-transferase
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** phi_class_glutathione_s-transferase
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** glutathione_s-
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.18 EC-2.5.1.18]
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* Synonym(s):
 
* Synonym(s):
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** GS/GOGAT pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''2''' reactions in the full pathway
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** 1 [[GLUTATHIONE]][c] '''+''' 1 [[CPD-10806]][c] '''=>''' 1 [[CPD-14704]][c]
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* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 glutathione[c] '''+''' 1 4-hydroxy-2-nonenal[c] '''=>''' 1 4-hydroxy-2-nonenal-glutathione conjugate[c]
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*** [[Tiso_gene_1773]]
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*** [[Tiso_gene_2581]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_1154]]
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Genes have been associated with this reaction based on different elements listed below.
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** 5 reconstruction source(s) associated:
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* [[Tiso_gene_5129]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
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***AUTOMATED-NAME-MATCH
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_19041]]
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_2775]]
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* [[GLUTAMINESYN-RXN]]
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** IN-SILICO_ANNOTATION
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** 4 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_14842]]
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* [[Tiso_gene_8389]]
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*** [[Tiso_gene_13754]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_13820]]
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***EC-NUMBER
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*** [[Tiso_gene_6647]]
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** EXPERIMENTAL_ANNOTATION
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** 6 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_3233]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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** EXPERIMENTAL_ANNOTATION
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*** [[orthology-synechocystis]]
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***EC-NUMBER
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*** [[manual-primary_network]]
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* [[Tiso_gene_1104]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6036]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19791]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20110]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8508]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8509]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7112]], 4-hydroxy-2-nonenal detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-2836}}
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{{#set: common name=glutathione_s-transferase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=phi_class_glutathione_s-transferase}}
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{{#set: common name=ammonia assimilation cycle II}}
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{{#set: common name=glutathione_s-}}
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{{#set: common name=GS/GOGAT pathway}}
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{{#set: ec number=EC-2.5.1.18}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_5129|Tiso_gene_19041|Tiso_gene_2775|Tiso_gene_8389|Tiso_gene_3233|Tiso_gene_1104|Tiso_gene_6036|Tiso_gene_19791|Tiso_gene_20110|Tiso_gene_8508|Tiso_gene_8509}}
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{{#set: total reaction=2}}
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{{#set: in pathway=PWY-7112}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:29, 21 March 2018

Pathway PWY-6964

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16313&oldid=34459"