Difference between revisions of "HGDO"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LNLNCACOAL LNLNCACOAL] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-Linolenic acid:CoA...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LNLNCACOAL LNLNCACOAL] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** acyl-coenzyme_a_oxidase
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** alpha-Linolenic acid:CoA ligase (AMP-forming)
* ec number:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-17385]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-17386]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** 1.0 [[LINOLENIC_ACID]][c] '''+''' 1.0 [[ATP]][c] '''+''' 1.0 [[CO-A]][c] '''=>''' 1.0 [[PPI]][c] '''+''' 1.0 [[LINOLENOYL-COA]][c] '''+''' 1.0 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
** 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
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** 1.0 α-linolenate[c] '''+''' 1.0 ATP[c] '''+''' 1.0 coenzyme A[c] '''=>''' 1.0 diphosphate[c] '''+''' 1.0 α-linolenoyl-CoA[c] '''+''' 1.0 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_18566]]
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* Gene: [[Tiso_gene_9394]]
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
***EC-NUMBER
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* Gene: [[Tiso_gene_12275]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 
** '''14''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
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* Category: [[orthology]]
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
*** Tool: [[pathwaytools]]
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*** Tool: [[pantograph]]
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: common name=alpha-Linolenic acid:CoA ligase (AMP-forming)}}
{{#set: ec number=EC-1.3.3.6}}
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{{#set: gene associated=Tiso_gene_9394|Tiso_gene_12275}}
{{#set: gene associated=Tiso_gene_18566}}
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{{#set: in pathway=}}
{{#set: in pathway=PWY-7606}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=orthology-creinhardtii}}
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:30, 21 March 2018

Reaction LNLNCACOAL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • alpha-Linolenic acid:CoA ligase (AMP-forming)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 α-linolenate[c] + 1.0 ATP[c] + 1.0 coenzyme A[c] => 1.0 diphosphate[c] + 1.0 α-linolenoyl-CoA[c] + 1.0 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links