Difference between revisions of "CPD1G-1345"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9723 RXN-9723] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_3527 == * right end position: ** 6319 * transcription direction: ** POSITIVE * left end position: ** 5150 * centisome position: ** 31.20644...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9723 RXN-9723] ==
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== Gene Tiso_gene_3527 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6319
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.3.1.77 EC-1.3.1.77]
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** POSITIVE
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* left end position:
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** 5150
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* centisome position:
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** 31.206448   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PHOSGLYPHOS-RXN]]
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** 1 [[CPD-7090]][c] '''+''' 2 [[NADPH]][c] '''+''' 3 [[PROTON]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[CPD-10411]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 delphinidin[c] '''+''' 2 NADPH[c] '''+''' 3 H+[c] '''=>''' 2 NADP+[c] '''+''' 1 (-)-epigallocatechin[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15272]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9504]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6035]], 2,3-cis-flavanols biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[PWY-1042]]
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* [[PWY66-399]]
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* [[GLUCONEO-PWY]]
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* [[SUCSYN-PWY]]
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* [[PWY-6901]]
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* [[P124-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6886]]
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* [[CALVIN-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[P122-PWY]]
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* [[P185-PWY]]
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* [[PWY-5484]]
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* [[PWY-7003]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=6319}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06543 R06543]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5150}}
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{{#set: ec number=EC-1.3.1.77}}
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{{#set: centisome position=31.206448    }}
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{{#set: gene associated=Tiso_gene_15272|Tiso_gene_9504}}
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{{#set: reaction associated=PHOSGLYPHOS-RXN}}
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{{#set: in pathway=PWY-6035}}
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{{#set: pathway associated=PWY-1042|PWY66-399|GLUCONEO-PWY|SUCSYN-PWY|PWY-6901|P124-PWY|GLYCOLYSIS|PWY-6886|CALVIN-PWY|ANAGLYCOLYSIS-PWY|P122-PWY|P185-PWY|PWY-5484|PWY-7003}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:30, 21 March 2018

Gene Tiso_gene_3527

  • right end position:
    • 6319
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5150
  • centisome position:
    • 31.206448
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD1G-1345&oldid=34552"