Difference between revisions of "Very-long-chain-fatty-acids"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] == * direction: ** LEFT-TO-RIGHT * common name: ** ketopantoate_hydroxymethylt...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DMHL DMHL] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3-Dihydroxy-3-methylbutanoate hydro...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DMHL DMHL] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ketopantoate_hydroxymethyltransferase
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** 2,3-Dihydroxy-3-methylbutanoate hydro-lyase
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* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[METHYLENETETRAHYDROMETHANOPTERIN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THMPT]][c]
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** 1.0 [[CPD-13357]][m] '''=>''' 1.0 [[2-KETO-ISOVALERATE]][m] '''+''' 1.0 [[WATER]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 5,10-methylene-tetrahydromethanopterin[c] '''+''' 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''=>''' 1 2-dehydropantoate[c] '''+''' 1 tetrahydromethanopterin[c]
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** 1.0 (2R)-2,3-dihydroxy-3-methylbutanoate[m] '''=>''' 1.0 3-methyl-2-oxobutanoate[m] '''+''' 1.0 H2O[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14465]]
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* Gene: [[Tiso_gene_1563]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_14466]]
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−
** IN-SILICO_ANNOTATION
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−
***AUTOMATED-NAME-MATCH
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== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6654]], phosphopantothenate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6654 PWY-6654]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ketopantoate_hydroxymethyltransferase}}
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{{#set: common name=2,3-Dihydroxy-3-methylbutanoate hydro-lyase}}
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{{#set: ec number=EC-2.1.2.11}}
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{{#set: gene associated=Tiso_gene_1563}}
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{{#set: gene associated=Tiso_gene_14465|Tiso_gene_14466}}
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{{#set: in pathway=}}
−
{{#set: in pathway=PWY-6654}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:31, 21 March 2018

Reaction DMHL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3-Dihydroxy-3-methylbutanoate hydro-lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (2R)-2,3-dihydroxy-3-methylbutanoate[m] => 1.0 3-methyl-2-oxobutanoate[m] + 1.0 H2O[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Very-long-chain-fatty-acids&oldid=34611"