Difference between revisions of "RXN-12184"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** structure-specific_en...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12258 CPD-12258] == * smiles: ** CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12258 CPD-12258] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)
 
* common name:
 
* common name:
−
** structure-specific_endonuclease_subunit_slx1_homolog
+
** UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/3.1.22.4 EC-3.1.22.4]
+
** InChIKey=FOEDSVRZGQIXSP-XSOIKTQOSA-K
 +
* molecular weight:
 +
** 1075.843   
 
* Synonym(s):
 
* Synonym(s):
 +
** UDP-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala)
 +
** UDP-MurNAc-tetrapeptide
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-11347]]
−
** 1 [[DNA-Combined-With-Exogenous-DNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Resolution-of-Recombinational-Junction]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 DNA combined with exogenous DNA to form a recombinational junction[c] '''+''' 1 H2O[c] '''=>''' 1 resolution of recombinational junction formation of two intact strands[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_11797]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* PUBCHEM:
−
** [http://www.uniprot.org/uniprot/P0A814 P0A814]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658175 90658175]
−
** [http://www.uniprot.org/uniprot/P44633 P44633]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/O83530 O83530]
+
** [http://www.genome.jp/dbget-bin/www_bget?C06432 C06432]
−
** [http://www.uniprot.org/uniprot/O84510 O84510]
+
{{#set: smiles=CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)}}
−
** [http://www.uniprot.org/uniprot/O25544 O25544]
+
{{#set: common name=UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine}}
−
** [http://www.uniprot.org/uniprot/Q9PLU8 Q9PLU8]
+
{{#set: inchi key=InChIKey=FOEDSVRZGQIXSP-XSOIKTQOSA-K}}
−
** [http://www.uniprot.org/uniprot/Q51424 Q51424]
+
{{#set: molecular weight=1075.843    }}
−
** [http://www.uniprot.org/uniprot/Q37873 Q37873]
+
{{#set: common name=UDP-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala)|UDP-MurNAc-tetrapeptide}}
−
** [http://www.uniprot.org/uniprot/P0AG74 P0AG74]
+
{{#set: consumed by=RXN-11347}}
−
** [http://www.uniprot.org/uniprot/Q55506 Q55506]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=structure-specific_endonuclease_subunit_slx1_homolog}}
+
−
{{#set: ec number=EC-3.1.22.4}}
+
−
{{#set: gene associated=Tiso_gene_11797}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:31, 21 March 2018

Metabolite CPD-12258

  • smiles:
    • CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)
  • common name:
    • UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
  • inchi key:
    • InChIKey=FOEDSVRZGQIXSP-XSOIKTQOSA-K
  • molecular weight:
    • 1075.843
  • Synonym(s):
    • UDP-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala)
    • UDP-MurNAc-tetrapeptide

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12184&oldid=34656"