Difference between revisions of "Tiso gene 13522"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-3-4-Saturated-L-Phosphatidates 2-3-4-Saturated-L-Phosphatidates] == * common name: ** a 1,2-d...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] == * direction: ** REVERSIBLE * common name: ** 3-is...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-3-4-Saturated-L-Phosphatidates 2-3-4-Saturated-L-Phosphatidates] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
−
** a 1,2-diacyl-sn-glycerol 3-phosphate
+
** 3-isopropylmalate dehydratase
 +
** ORF
 
* Synonym(s):
 
* Synonym(s):
−
** an L-phosphatidate
+
** (2R,3S)-3-isopropylmalate hydro-lyase
−
** a 3-sn-phosphatidate
+
** β-isopropylmalate dehydratase
−
** a diacyl-glycerol-3P
+
** α-isopropylmalate isomerase
−
** a 2,3,4-saturated L-phosphatidate
+
** 3-isopropylmalate hydro-lyase
−
** a phosphatidic acid
+
−
** a 1,2-diacylglycerol 3-phosphate
+
−
** a phosphatidate
+
−
** a diacylglycerol 3-phosphate
+
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN0-5515]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-9451]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
−
* [[RXN0-5514]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 H2O[c] '''+''' 1 2-isopropylmaleate[c] '''<=>''' 1 (2S)-2-isopropylmalate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_12778]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a 1,2-diacyl-sn-glycerol 3-phosphate}}
+
* RHEA:
−
{{#set: common name=an L-phosphatidate|a 3-sn-phosphatidate|a diacyl-glycerol-3P|a 2,3,4-saturated L-phosphatidate|a phosphatidic acid|a 1,2-diacylglycerol 3-phosphate|a phosphatidate|a diacylglycerol 3-phosphate}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16293 16293]
−
{{#set: consumed by=RXN0-5515}}
+
* LIGAND-RXN:
−
{{#set: produced by=RXN0-5514}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03968 R03968]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9PLW1 Q9PLW1]
 +
** [http://www.uniprot.org/uniprot/Q9JU82 Q9JU82]
 +
** [http://www.uniprot.org/uniprot/P80858 P80858]
 +
** [http://www.uniprot.org/uniprot/Q9UZ07 Q9UZ07]
 +
** [http://www.uniprot.org/uniprot/Q9JU81 Q9JU81]
 +
** [http://www.uniprot.org/uniprot/Q58673 Q58673]
 +
** [http://www.uniprot.org/uniprot/Q02144 Q02144]
 +
** [http://www.uniprot.org/uniprot/P44968 P44968]
 +
** [http://www.uniprot.org/uniprot/Q58667 Q58667]
 +
** [http://www.uniprot.org/uniprot/P44438 P44438]
 +
** [http://www.uniprot.org/uniprot/P0A6A6 P0A6A6]
 +
** [http://www.uniprot.org/uniprot/Q9PLW2 Q9PLW2]
 +
** [http://www.uniprot.org/uniprot/Q44022 Q44022]
 +
** [http://www.uniprot.org/uniprot/Q44023 Q44023]
 +
** [http://www.uniprot.org/uniprot/Q44427 Q44427]
 +
** [http://www.uniprot.org/uniprot/P17279 P17279]
 +
** [http://www.uniprot.org/uniprot/P04787 P04787]
 +
** [http://www.uniprot.org/uniprot/P15717 P15717]
 +
** [http://www.uniprot.org/uniprot/P18250 P18250]
 +
** [http://www.uniprot.org/uniprot/Q02142 Q02142]
 +
** [http://www.uniprot.org/uniprot/P30126 P30126]
 +
** [http://www.uniprot.org/uniprot/P50181 P50181]
 +
** [http://www.uniprot.org/uniprot/P07264 P07264]
 +
** [http://www.uniprot.org/uniprot/P74207 P74207]
 +
** [http://www.uniprot.org/uniprot/O86534 O86534]
 +
** [http://www.uniprot.org/uniprot/O86535 O86535]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=3-isopropylmalate dehydratase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}}
 +
{{#set: gene associated=Tiso_gene_12778}}
 +
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:32, 21 March 2018

Reaction 3-ISOPROPYLMALISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase
    • ORF
  • Synonym(s):
    • (2R,3S)-3-isopropylmalate hydro-lyase
    • β-isopropylmalate dehydratase
    • α-isopropylmalate isomerase
    • 3-isopropylmalate hydro-lyase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13522&oldid=34760"