Difference between revisions of "Tiso gene 8576"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
(Created page with "Category:Gene == Gene Tiso_gene_81 == * right end position: ** 42727 * transcription direction: ** NEGATIVE * left end position: ** 38006 * centisome position: ** 80.48367...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] ==
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== Gene Tiso_gene_81 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 42727
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* common name:
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* transcription direction:
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** 3-oxoacyl-synthase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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** 38006
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* centisome position:
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** 80.48367   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RIBOKIN-RXN]]
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** 1 [[Cis-Delta7-tetradecenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[3-oxo-cis-D9-hexadecenoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a cis-Δ7-tetradecenoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a 3-oxo-cis-Δ9-hexadecenoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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* Reaction: [[RXN-14223]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5939]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19302]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[RIBOKIN-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=42727}}
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{{#set: common name=3-oxoacyl-synthase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: left end position=38006}}
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{{#set: gene associated=Tiso_gene_14485|Tiso_gene_15991|Tiso_gene_5939|Tiso_gene_19302}}
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{{#set: centisome position=80.48367    }}
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{{#set: in pathway=PWY-6282}}
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{{#set: reaction associated=RIBOKIN-RXN|RXN-14223}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=RIBOKIN-PWY}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:35, 21 March 2018

Gene Tiso_gene_81

  • right end position:
    • 42727
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 38006
  • centisome position:
    • 80.48367
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8576&oldid=34974"