Difference between revisions of "CPD-4702"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_6675 == * left end position: ** 6956 * transcription direction: ** POSITIVE * right end position: ** 8416 * centisome position: ** 58.2482...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7700 RXN-7700] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF *...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_6675 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7700 RXN-7700] ==
−
* left end position:
+
* direction:
−
** 6956
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** polyketide_synthase
−
* right end position:
+
** ORF
−
** 8416
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
−
** 58.2482   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[1.1.1.39-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[NADH]][c] '''+''' 1 [[PHENYLACETALDEHYDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[CPD-7035]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 1 NADH[c] '''+''' 1 phenylacetaldehyde[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 2-phenylethanol[c]
−
***ec-number
+
 
−
* [[MALIC-NADP-RXN]]
+
== Genes associated with this reaction  ==
−
** [[pantograph]]-[[synechocystis]]
+
Genes have been associated with this reaction based on different elements listed below.
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_7649]]
−
* [[PWY-3641]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[GLUCONEO-PWY]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-7384]]
+
* Gene: [[Tiso_gene_6562]]
−
* [[PWY-7686]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7117]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-7115]]
+
* Gene: [[Tiso_gene_5425]]
−
* [[PWY-7118]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-241]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-5079]], L-phenylalanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5751]], phenylethanol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5751 PWY-5751]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6956}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02611 R02611]
−
{{#set: right end position=8416}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=58.2482    }}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: reaction associated=1.1.1.39-RXN|MALIC-NADP-RXN}}
+
{{#set: common name=ORF}}
−
{{#set: pathway associated=PWY-3641|GLUCONEO-PWY|PWY-7384|PWY-7686|PWY-7117|PWY-7115|PWY-7118|PWY-241}}
+
{{#set: ec number=EC-1.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_7649|Tiso_gene_6562|Tiso_gene_5425|Tiso_gene_5424|Tiso_gene_6563}}
 +
{{#set: in pathway=PWY-5079|PWY-5751}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:35, 21 March 2018

Reaction RXN-7700

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 phenylacetaldehyde[c] + 1 H+[c] => 1 NAD+[c] + 1 2-phenylethanol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5079, L-phenylalanine degradation III: PWY-5079
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5751, phenylethanol biosynthesis: PWY-5751
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-4702&oldid=35035"