Difference between revisions of "RXN-14785"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** long_chain_acyl-_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17862 RXN-17862] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17862 RXN-17862] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** long_chain_acyl-_synthetase
 
** polyketide_synthase
 
** acyl-_synthetase
 
** ORF
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** [http://enzyme.expasy.org/EC/2.3.1.bu EC-2.3.1.bu]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[PPI]][c]
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** 1 [[N-terminal-glycine]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-terminal-N-Ac-glycine]][c]
 
* With common name(s):
 
* With common name(s):
** 1 α-linolenate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 α-linolenoyl-CoA[c] '''+''' 1 diphosphate[c]
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** 1 an N-terminal glycyl-[protein][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 H+[c] '''+''' 1 an N-terminal Nα-acetyl-glycyl-[protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_348]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_4191]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_7855]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_10876]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_500]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_13394]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_136]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_135]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_9394]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
** '''2''' reactions found over '''7''' reactions in the full pathway
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** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: ec number=EC-2.3.1.bu}}
{{#set: common name=polyketide_synthase}}
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{{#set: in pathway=PWY-7800}}
{{#set: common name=acyl-_synthetase}}
+
{{#set: reconstruction category=annotation}}
{{#set: common name=ORF}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
{{#set: ec number=EC-6.2.1.3}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: gene associated=Tiso_gene_348|Tiso_gene_4191|Tiso_gene_7855|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_135|Tiso_gene_9394}}
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{{#set: in pathway=PWY-7049|PWY-7724}}
+
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:36, 21 March 2018

Reaction RXN-17862

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links