Difference between revisions of "RXN-16066"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** phosphatidylinositol-4-kinase
 
−
** phosphatidylinositol_kinase
 
−
** phosphatidylinositol_4-kinase_beta
 
−
** ORF
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.67 EC-2.7.1.67]
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** [http://enzyme.expasy.org/EC/2.1.1.113 EC-2.1.1.113]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-1108]][c] '''+''' 1 [[PROTON]][c]
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** 1 [[DNA-Cytosines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-N4-Methylcytosine]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 an L-1-phosphatidyl-inositol[c] '''=>''' 1 ADP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''+''' 1 H+[c]
+
** 1 a cytosine in DNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an N4-methylcytosine in DNA[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17239]]
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* Gene: [[Tiso_gene_10259]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
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−
* [[Tiso_gene_18530]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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−
* [[Tiso_gene_12389]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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−
* [[Tiso_gene_2572]]
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−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
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−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18529]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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−
** EXPERIMENTAL_ANNOTATION
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−
***EC-NUMBER
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−
* [[Tiso_gene_17238]]
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−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17240]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
 
−
** '''3''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19877 19877]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361]
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** [http://www.genome.jp/dbget-bin/www_bget?R03003 R03003]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P18688 P18688]
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** [http://www.uniprot.org/uniprot/Q04845 Q04845]
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** [http://www.uniprot.org/uniprot/P12798 P12798]
+
−
** [http://www.uniprot.org/uniprot/P39104 P39104]
+
−
** [http://www.uniprot.org/uniprot/P42356 P42356]
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−
** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8]
+
−
** [http://www.uniprot.org/uniprot/P37297 P37297]
+
−
** [http://www.uniprot.org/uniprot/Q28925 Q28925]
+
−
** [http://www.uniprot.org/uniprot/O81281 O81281]
+
−
** [http://www.uniprot.org/uniprot/O81129 O81129]
+
−
** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phosphatidylinositol-4-kinase}}
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{{#set: ec number=EC-2.1.1.113}}
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{{#set: common name=phosphatidylinositol_kinase}}
+
{{#set: gene associated=Tiso_gene_10259}}
−
{{#set: common name=phosphatidylinositol_4-kinase_beta}}
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{{#set: in pathway=}}
−
{{#set: common name=ORF}}
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{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-2.7.1.67}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: gene associated=Tiso_gene_17239|Tiso_gene_18530|Tiso_gene_12389|Tiso_gene_2572|Tiso_gene_18529|Tiso_gene_17238|Tiso_gene_17240}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: in pathway=PWY-6352|PWY-6351}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 15:36, 21 March 2018

Reaction 2.1.1.113-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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