Difference between revisions of "Tiso gene 5194"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] == * smiles: ** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O * inchi key: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=COBALAMINSYN-RXN COBALAMINSYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=COBALAMINSYN-RXN COBALAMINSYN-RXN] ==
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* smiles:
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* direction:
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** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
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** [http://enzyme.expasy.org/EC/2.7.8.26 EC-2.7.8.26]
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* common name:
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** dCMP
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* molecular weight:
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** 305.183   
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* Synonym(s):
 
* Synonym(s):
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** 2'-deoxycytidine 5'-monophosphate
 
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** deoxycytidylate
 
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** deoxycytidylic acid
 
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** deoxycytidine monophosphate
 
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** 2'-deoxycytidine 5'-phosphate
 
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** deoxycytidine-phosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[ATDCM]]
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* With identifiers:
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* [[RXN-7913]]
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** 1 [[ADENOSYLCOBINAMIDE-GDP]][c] '''+''' 1 [[ALPHA-RIBAZOLE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYLCOBALAMIN]][c] '''+''' 1 [[GMP]][c]
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* [[DCMP-DEAMINASE-RXN]]
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* With common name(s):
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* [[ATDCMf]]
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** 1 adenosylcobinamide-GDP[c] '''+''' 1 &alpha;-ribazole[c] '''<=>''' 1 H+[c] '''+''' 1 adenosylcobalamin[c] '''+''' 1 GMP[c]
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== Reaction(s) known to produce the compound ==
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* [[DCTP-PYROPHOSPHATASE-RXN]]
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== Genes associated with this reaction  ==
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* [[DCYTPT]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14198]]
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* Gene: [[Tiso_gene_8411]]
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* [[RXN-14187]]
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** Source: [[orthology-synechocystis]]
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== Reaction(s) of unknown directionality ==
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* Gene: [[Tiso_gene_8410]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[PWY-5508]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5508 PWY-5508]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 1032-65-1
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* RHEA:
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* METABOLIGHTS : MTBLC57566
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16049 16049]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058169 7058169]
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** [http://www.genome.jp/dbget-bin/www_bget?R05223 R05223]
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* HMDB : HMDB01202
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{{#set: direction=REVERSIBLE}}
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* LIGAND-CPD:
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{{#set: ec number=EC-2.7.8.26}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00239 C00239]
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{{#set: gene associated=Tiso_gene_8411|Tiso_gene_8410}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-5508}}
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** [http://www.chemspider.com/Chemical-Structure.5414501.html 5414501]
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{{#set: reconstruction category=orthology}}
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* CHEBI:
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{{#set: reconstruction source=orthology-synechocystis}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57566 57566]
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{{#set: reconstruction tool=pantograph}}
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* BIGG : dcmp
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{{#set: smiles=C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O}}
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{{#set: inchi key=InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L}}
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{{#set: common name=dCMP}}
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{{#set: molecular weight=305.183    }}
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{{#set: common name=2'-deoxycytidine 5'-monophosphate|deoxycytidylate|deoxycytidylic acid|deoxycytidine monophosphate|2'-deoxycytidine 5'-phosphate|deoxycytidine-phosphate}}
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{{#set: consumed by=ATDCM|RXN-7913|DCMP-DEAMINASE-RXN|ATDCMf}}
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{{#set: produced by=DCTP-PYROPHOSPHATASE-RXN|DCYTPT|RXN-14198|RXN-14187}}
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Revision as of 15:36, 21 March 2018

Reaction COBALAMINSYN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5508, adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: PWY-5508
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5194&oldid=35184"