Difference between revisions of "Pectin"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16594 RXN-16594] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7698 RXN-7698] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_re...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16594 RXN-16594] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7698 RXN-7698] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** chloroplast_beta-keto_acyl_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-171]][c] '''=>''' 1 [[CPD-171]][e]
+
** 1 [[Very-Long-Chain-oxoacyl-CoAs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Very-Long-Chain-3-Hydroxyacyl-CoAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a dolichyl β-D-mannosyl phosphate[c] '''=>''' 1 a dolichyl β-D-mannosyl phosphate[e]
+
** 1 a very-long-chain oxoacyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a very-long-chain (3R)-3-hydroxyacyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_9871]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[PWY-5080]], very long chain fatty acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5080 PWY-5080]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22256 22256]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01779 R01779]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9ZGI8 Q9ZGI8]
 +
** [http://www.uniprot.org/uniprot/Q9Z3Y5 Q9Z3Y5]
 +
** [http://www.uniprot.org/uniprot/P45375 P45375]
 +
** [http://www.uniprot.org/uniprot/P23238 P23238]
 +
** [http://www.uniprot.org/uniprot/P14697 P14697]
 +
** [http://www.uniprot.org/uniprot/P17611 P17611]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
 +
{{#set: ec number=EC-1.1.1.330}}
 +
{{#set: gene associated=Tiso_gene_9871}}
 +
{{#set: in pathway=PWY-5080}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:37, 21 March 2018

Reaction RXN-7698

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5080, very long chain fatty acid biosynthesis I: PWY-5080
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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