Difference between revisions of "2.4.1.229-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_15327 == * left end position: ** 24 * transcription direction: ** POSITIVE * right end position: ** 1959 * centisome position: ** 0.4711425...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] == * direction: ** LEFT-TO-RIGHT * common name: ** tryptophan_synthase_(alpha_...") |
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| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** tryptophan_synthase_(alpha_beta_chains) |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/4.2.1.122 EC-4.2.1.122] |
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* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | ** [[ | + | ** 1 [[INDOLE]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c] |
| − | + | * With common name(s): | |
| − | + | ** 1 indole[c] '''+''' 1 L-serine[c] '''=>''' 1 L-tryptophan[c] '''+''' 1 H2O[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | * | + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** [ | + | * Gene: [[Tiso_gene_17207]] |
| − | + | ** Source: [[orthology-esiliculosus]] | |
| − | + | * Gene: [[Tiso_gene_4604]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Assignment: EC-NUMBER | |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | * | + | *** Assignment: EC-NUMBER |
| − | * | + | ** Source: [[orthology-esiliculosus]] |
| − | + | == Pathways == | |
| − | + | * [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY] | |
| − | * [[ | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| − | + | == Reconstruction information == | |
| − | + | * Category: [[orthology]] | |
| − | + | ** Source: [[orthology-esiliculosus]] | |
| − | + | *** Tool: [[pantograph]] | |
| − | + | * Category: [[annotation]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Tool: [[pathwaytools]] | |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | + | *** Tool: [[pathwaytools]] | |
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| − | == Pathways | + | |
| − | * [[ | + | |
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== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26434 26434] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=tryptophan_synthase_(alpha_beta_chains)}} |
| + | {{#set: ec number=EC-4.2.1.122}} | ||
| + | {{#set: gene associated=Tiso_gene_17207|Tiso_gene_4604}} | ||
| + | {{#set: in pathway=TRPSYN-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:37, 21 March 2018
Contents
Reaction RXN0-2382
- direction:
- LEFT-TO-RIGHT
- common name:
- tryptophan_synthase_(alpha_beta_chains)
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 indole[c] + 1 L-serine[c] => 1 L-tryptophan[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_17207
- Source: orthology-esiliculosus
- Gene: Tiso_gene_4604
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
