Difference between revisions of "Tiso gene 19998"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLYLSULFKIN-RXN ADENYLYLSULFKIN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzy...")
(Created page with "Category:Gene == Gene Tiso_gene_1959 == * right end position: ** 20506 * transcription direction: ** NEGATIVE * left end position: ** 16698 * centisome position: ** 79.412...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLYLSULFKIN-RXN ADENYLYLSULFKIN-RXN] ==
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== Gene Tiso_gene_1959 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 20506
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.7.1.25 EC-2.7.1.25]
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** NEGATIVE
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* left end position:
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** 16698
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* centisome position:
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** 79.412186   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[APS]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[PAPS]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 adenosine 5'-phosphosulfate[c] '''<=>''' 1 H+[c] '''+''' 1 3'-phosphoadenylyl-sulfate[c] '''+''' 1 ADP[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_17879]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** Assignment: ec-number
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* [[Tiso_gene_16197]]
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* Reaction: [[RXN-12196]]
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** [[pantograph]]-[[synechocystis]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_1110]]
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*** Assignment: ec-number
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** [[pantograph]]-[[synechocystis]]
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* Reaction: [[RXN0-5462]]
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* [[Tiso_gene_9490]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** Assignment: ec-number
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* [[Tiso_gene_17878]]
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== Pathways associated ==
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** [[pantograph]]-[[athaliana]]
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* [[PWY-7184]]
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** [[pantograph]]-[[synechocystis]]
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* [[PWY-7198]]
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-6545]]
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-7210]]
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== Pathways  ==
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* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=20506}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24152 24152]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=16698}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00509 R00509]
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{{#set: centisome position=79.412186    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P0A6J1 P0A6J1]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/Q10600 Q10600]
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** [http://www.uniprot.org/uniprot/O67174 O67174]
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** [http://www.uniprot.org/uniprot/Q9PMP2 Q9PMP2]
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** [http://www.uniprot.org/uniprot/P28604 P28604]
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** [http://www.uniprot.org/uniprot/Q27128 Q27128]
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** [http://www.uniprot.org/uniprot/O43252 O43252]
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** [http://www.uniprot.org/uniprot/Q02196 Q02196]
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** [http://www.uniprot.org/uniprot/P29811 P29811]
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** [http://www.uniprot.org/uniprot/Q43295 Q43295]
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** [http://www.uniprot.org/uniprot/P72940 P72940]
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** [http://www.uniprot.org/uniprot/O49196 O49196]
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** [http://www.uniprot.org/uniprot/O49204 O49204]
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** [http://www.uniprot.org/uniprot/P13442 P13442]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.7.1.25}}
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{{#set: gene associated=Tiso_gene_17879|Tiso_gene_16197|Tiso_gene_1110|Tiso_gene_9490|Tiso_gene_17878}}
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{{#set: in pathway=PWY-5340}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:38, 21 March 2018

Gene Tiso_gene_1959

  • right end position:
    • 20506
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 16698
  • centisome position:
    • 79.412186
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19998&oldid=35308"