Difference between revisions of "Tiso gene 19998"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLYLSULFKIN-RXN ADENYLYLSULFKIN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzy...")
(Created page with "Category:Gene == Gene Tiso_gene_1959 == * right end position: ** 20506 * transcription direction: ** NEGATIVE * left end position: ** 16698 * centisome position: ** 79.412...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLYLSULFKIN-RXN ADENYLYLSULFKIN-RXN] ==
+
== Gene Tiso_gene_1959 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 20506
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/2.7.1.25 EC-2.7.1.25]
+
** NEGATIVE
 +
* left end position:
 +
** 16698
 +
* centisome position:
 +
** 79.412186   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ATPASE-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[APS]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[PAPS]][c] '''+''' 1 [[ADP]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 ATP[c] '''+''' 1 adenosine 5'-phosphosulfate[c] '''<=>''' 1 H+[c] '''+''' 1 3'-phosphoadenylyl-sulfate[c] '''+''' 1 ADP[c]
+
* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-12195]]
−
* [[Tiso_gene_17879]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: ec-number
−
* [[Tiso_gene_16197]]
+
* Reaction: [[RXN-12196]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_1110]]
+
*** Assignment: ec-number
−
** [[pantograph]]-[[synechocystis]]
+
* Reaction: [[RXN0-5462]]
−
* [[Tiso_gene_9490]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[synechocystis]]
+
*** Assignment: ec-number
−
* [[Tiso_gene_17878]]
+
== Pathways associated ==
−
** [[pantograph]]-[[athaliana]]
+
* [[PWY-7184]]
−
** [[pantograph]]-[[synechocystis]]
+
* [[PWY-7198]]
−
** [[pantograph]]-[[creinhardtii]]
+
* [[PWY-6545]]
−
** [[pantograph]]-[[creinhardtii]]
+
* [[PWY-7210]]
−
== Pathways  ==
+
−
* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-synechocystis]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=20506}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24152 24152]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=16698}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00509 R00509]
+
{{#set: centisome position=79.412186    }}
−
* UNIPROT:
+
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
−
** [http://www.uniprot.org/uniprot/P0A6J1 P0A6J1]
+
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
−
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
+
−
** [http://www.uniprot.org/uniprot/O67174 O67174]
+
−
** [http://www.uniprot.org/uniprot/Q9PMP2 Q9PMP2]
+
−
** [http://www.uniprot.org/uniprot/P28604 P28604]
+
−
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
+
−
** [http://www.uniprot.org/uniprot/O43252 O43252]
+
−
** [http://www.uniprot.org/uniprot/Q02196 Q02196]
+
−
** [http://www.uniprot.org/uniprot/P29811 P29811]
+
−
** [http://www.uniprot.org/uniprot/Q43295 Q43295]
+
−
** [http://www.uniprot.org/uniprot/P72940 P72940]
+
−
** [http://www.uniprot.org/uniprot/O49196 O49196]
+
−
** [http://www.uniprot.org/uniprot/O49204 O49204]
+
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-2.7.1.25}}
+
−
{{#set: gene associated=Tiso_gene_17879|Tiso_gene_16197|Tiso_gene_1110|Tiso_gene_9490|Tiso_gene_17878}}
+
−
{{#set: in pathway=PWY-5340}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 16:38, 21 March 2018

Gene Tiso_gene_1959

  • right end position:
    • 20506
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 16698
  • centisome position:
    • 79.412186
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19998&oldid=35308"